Esox lucius (northern pike): 105031073
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Entry
105031073 CDS
T04894
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
els
Esox lucius (northern pike)
Pathway
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105031073 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105031073 (cpsf4)
03019 Messenger RNA biogenesis [BR:
els03019
]
105031073 (cpsf4)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105031073 (cpsf4)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105031073 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
Nab2-like_zf-CCCH_
zf-CCHC_3
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
105031073
NCBI-ProteinID:
XP_010903585
UniProt:
A0A6Q2YQU1
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All DBs
Position
LG11:complement(4025102..4029757)
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AA seq
272 aa
AA seq
DB search
MQDLIATVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACIKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGRTCKFMHPRFELPMGATEQPP
LPQQVQNHQKPVPSLGRSSLSLIQLTNPGGGGGHHQRQPYTSGPSMHQHHNNIAIGSRGP
RPLDQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctgattgccactgttgaccacatcaagttcgatctggagatcgcggtggag
cagcaactcggggcacaacccctccccttccccgggatggacaagtcgggagctgcagtt
tgtgagttcttcatgagagcagcctgtattaaaggtggcatgtgtccgtttcgtcacatc
agtggggagaagacggtggtttgtaaacactggctgagaggactctgtaaaaagggtgac
caatgcgagttcctacacgagtatgacatgacaaagatgcccgagtgctacttctactcc
aagtttggggaatgcagcaacaaagagtgtccgttcctgcacatcgatccagagtcaaag
atcaaagactgtccatggtatgacagaggcttctgcaagcatggtccagactgcagacac
cgccacaccagaagagtgatctgtgtcaactacttagttggtttctgtccagagggacgg
acctgtaaattcatgcacccacggtttgagctgccaatgggggccactgaacagccacct
ctaccacaacaggtacagaaccatcagaagccggtgccttcacttggccgctcatccctg
tcactcatccagctgaccaatccaggcggagggggcgggcaccaccagcgtcagccgtac
acctctggtcccagcatgcatcagcaccacaacaacattgcaataggcagcagagggcca
cgccctctggatcaggtcacctgctataagtgtggggagaaggggcactatgccaacaaa
tgcaccaaaggacatctggccttcctcagcggacagtga
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integrated database retrieval system
