Elizabethkingia sp. JS20170427COW: FGE20_03185
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Entry
FGE20_03185 CDS
T06442
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
elt
Elizabethkingia sp. JS20170427COW
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elt03009
]
FGE20_03185 (rimO)
Enzymes [BR:
elt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FGE20_03185 (rimO)
Ribosome biogenesis [BR:
elt03009
]
Prokaryotic type
ribosomal protein modification factors
FGE20_03185 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QCX52817
UniProt:
A0A5B7UF84
LinkDB
All DBs
Position
complement(719830..721137)
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AA seq
435 aa
AA seq
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MRTKSSHKKKINLVTLGCSKNVYDSEVIMGQLKASGKDVVHEEKGDIVVINTCGFIDNAK
EESVNTILEYVELKKEGKVEKVFVTGCLSARYKPDLEQEIPDVDQYFMGPRELPILLKQL
GADYKHELVGERLTTTPKHYAYLKISEGCDRPCTFCAIPLMRGGHISTPIENLVKEAENL
AKNGVKELILIAQDLTFYGLDLYKKRALGDLLKELVKVEGIEWIRLHYAFPTGFPEDVLE
IIKNEPKICNYIDIPLQHINDEVLKRMKRGTSHEKTNALLAKFRGKVPQMAIRTTLIVGF
PGETEEQFEELKNWVKEQRFDRLGCFTYSHEENTGAFEFEDDVPEEVKERRVEEIMEIQQ
QISFEINQEKVGKTFRCLFDRKEGNYFVGRTEFDSPDVDNTVLVPAEGVYISMGEFVNVK
ITSAEEFDLYGEVVD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcttcacataaaaagaaaattaatttagtaaccttaggttgctccaaa
aatgtctatgattctgaagtaattatgggccaattaaaagccagtggcaaagatgtggtt
catgaagaaaaaggagatatagtagtgattaatacttgtggttttatcgataatgcgaaa
gaagagagtgttaatactattttggagtatgtagagcttaaaaaggaaggtaaagtagaa
aaagtatttgtaacgggatgtttatctgcgagatataagccagatttggagcaagaaatt
ccagatgtagatcaatacttcatggggccaagagagcttcctattttattgaaacaatta
ggggcagattataagcatgagctggttggggaacgtcttactaccactccaaagcattat
gcttacttaaaaatttctgaaggttgcgacaggccatgtactttctgtgcgattcctttg
atgcgtggtggacacatttcaactccaattgaaaatttggtaaaagaagctgaaaactta
gcaaaaaatggagtgaaagagttaattcttatcgctcaggatcttaccttctatggttta
gatttatataaaaaacgagctttaggagatttactaaaagagttggtaaaggtagaaggt
atcgaatggataagattgcactatgccttcccaacaggtttcccagaagatgtactggaa
attattaaaaacgagcctaaaatttgtaactatattgatattcctttacaacatatcaat
gatgaggtgttgaagagaatgaagagaggtacttctcatgaaaaaaccaatgccttgttg
gcgaagtttagaggaaaagttcctcagatggcaatccgtactacgcttattgtaggtttc
cctggtgagacagaagaacagtttgaggaattaaaaaactgggtaaaagaacaacgtttt
gatcgtttaggttgtttcacctattctcatgaagaaaatacaggagctttcgagtttgaa
gatgatgtaccagaagaggtgaaagaaagaagagtagaagaaatcatggagatacaacaa
cagatttcttttgaaattaatcaagagaaagtagggaaaaccttcagatgtctattcgat
agaaaagaaggaaattactttgtgggaagaaccgaatttgattccccagatgtggataat
accgtattggttccggctgagggtgtttatatcagcatgggtgaatttgtaaatgtgaaa
attacttccgctgaagaatttgatctttatggtgaagtagtcgattaa
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