Elizabethkingia sp. JS20170427COW: FGE20_03325
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Entry
FGE20_03325 CDS
T06442
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
elt
Elizabethkingia sp. JS20170427COW
Pathway
elt03030
DNA replication
elt03430
Mismatch repair
elt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGE20_03325
03430 Mismatch repair
FGE20_03325
03440 Homologous recombination
FGE20_03325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elt03032
]
FGE20_03325
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_03325
Enzymes [BR:
elt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGE20_03325
DNA replication proteins [BR:
elt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FGE20_03325
DNA repair and recombination proteins [BR:
elt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FGE20_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
QCX52841
LinkDB
All DBs
Position
complement(753161..753925)
Genome browser
AA seq
254 aa
AA seq
DB search
MNLKLHKPLCVFDLETTGLNISKDRIIEICILKVFPDASRESKIWLVNPEMPISKEASEV
HGITNEMVADKPTLREIAPKIIEMIKDSDLGGFNSNRFDIPLLAEELLRVGYDFDLSKHK
PIDVQTIYHKMEPRNLSAAYQYYCGKNLDNAHSAEADTLATFEILDAQVGKYNDLGNDAN
TLSEFSFHKRSADLAGFIGYNDQEEEIFSFGKYKGQKVTDIFEKDPGYFGWIQNADFPLY
TKKILTAIKLKSKF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaactgcataaacccctttgtgtcttcgatttggagactacaggtcttaat
atttctaaagatagaattatagaaatttgtattttaaaagtatttcccgatgcctctaga
gaatctaaaatctggctggtaaatcctgagatgccaatttctaaggaagcaagtgaagtg
catggtatcaccaatgaaatggtagcggataagccaacacttagagaaatagctcctaag
attatagagatgattaaagattctgatttgggaggttttaattctaaccgttttgatatt
cctttattggctgaagagttgttaagagtaggctatgattttgatttaagcaaacacaag
ccgatagatgtacaaaccatttaccataaaatggaacctagaaatctttctgcagcatat
caatattattgtggaaaaaatttggataacgcccattcagcagaagctgatactctagct
acatttgaaattttagatgcacaagtgggaaaatataacgacttgggaaatgatgcaaat
accctaagtgaattttctttccataaacgcagtgctgacttagcaggttttattggatat
aatgatcaggaggaagaaatattctcttttggaaagtataaaggacagaaagttacagat
atttttgagaaagatccaggatattttggatggatacagaatgcggatttccctctatat
actaaaaagattcttaccgcaattaagttaaaaagtaaattttag
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