Elizabethkingia sp. JS20170427COW: FGE20_05895
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Entry
FGE20_05895 CDS
T06442
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
elt
Elizabethkingia sp. JS20170427COW
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elt03032
]
FGE20_05895 (topA)
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_05895 (topA)
Enzymes [BR:
elt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FGE20_05895 (topA)
DNA replication proteins [BR:
elt03032
]
Prokaryotic type
DNA Topoisomerases
FGE20_05895 (topA)
DNA repair and recombination proteins [BR:
elt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FGE20_05895 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HTH_24
HTH_Crp_2
HTH_IclR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QCX53298
UniProt:
A0A5B7UGI2
LinkDB
All DBs
Position
1306628..1309189
Genome browser
AA seq
853 aa
AA seq
DB search
MAKNLVIVESPAKAKTIQKYLGNDFEVTSSMGHIRDLPKKGMGINLESFTPDYEVSSDKK
KLVTELKSKVKKAEMVWLASDEDREGEAIAWHLADELKLKEEKTKRIVFHEITKAAILKA
VENPRKIDKNLVDAQQARRVLDRVVGFELSPVLWKKVKMGLSAGRVQSVAVRLVVEREQE
IYDFQPVASYKVEGLFINKDKKDVSAKIKKDFETETEAETFLKQCKETDFQVLNVEKKPG
QRSASAPFTTSTLQQEASNRLGYSVTTTMRVAQRLYEEGYITYMRTDSVNLSQEAIQAAQ
QTIIKEYGEEYSAPRNYTTKNASAQEAHEAIRPTDFKLKTVGDAQLNKLYQLIYKRAMAS
QMANTRIEKTIIEIGDAQLQPHFEAAGEVIVFDGFLKVYGITQSDEEEEENNEKLLPKVS
IGEHLSYKNIIATQKYTKAPARFTEASLVRKLEELGIGRPSTYAPTIQTIQNREYVEKRE
VLAKEREIIQLTLSKELTKTVLIEKYGADKNKFLPTDIGVVVNNFLVENFAQILDYGFTA
RVEESFDTIAAGKEEWRTVMHDFYNKFHPKIVDVEENAERATGDHVLGVDPKTGKNVHAR
IGRFGPMVQIGEVDDEEKPIFASLLPHQNISTITLEEALELFKIPFTLNDYDGKEVMVGV
GRFGPYVKWGDTFISLPKGEDPLTVNNERAIEIIEEKKKADAPIATYKGEEVTKGVGRFG
PFLKYKNLYINVSKKYNFDALSQDDIVELIEAKLEKEANRFIQQWEDHKVALENGRWGPF
IRFKKKMLKIPLKAKGEKYTAEDLKDIDFEMVKAWIMEQDETAFKEKAKKTATKKTTKTT
TKKTTKTAAKKTK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaatctcgtaattgtggagtccccagcgaaggctaaaaccatacaaaaatac
ctcggaaatgattttgaggtaacctccagtatggggcatattcgtgatctccctaaaaaa
ggaatgggaataaaccttgaaagctttactcctgattatgaagtttcttcggataaaaaa
aagttggtcactgagctgaagagtaaagtgaaaaaagcagaaatggtgtggctagcttcc
gatgaagaccgtgagggagaagctatagcatggcatttggcagatgaattgaagttgaaa
gaagagaagactaaaagaatagtttttcatgaaattacaaaagctgcaattttaaaggct
gttgaaaatcctaggaagattgataaaaacttggtagatgctcaacaagcaagaagagta
ttggatagagtggtaggttttgagctttctcctgtgctttggaagaaagtgaagatggga
ctttccgcagggagagtacagtcggttgctgtacgtcttgtggtggagagagaacaagaa
atttatgatttccaacctgtcgcatcttataaggtagaaggcttatttatcaataaagat
aaaaaagatgtttcggcaaaaattaaaaaagattttgaaacagaaacagaagctgaaaca
tttttaaaacaatgtaaagaaaccgacttccaggtacttaatgtagaaaagaaacctggg
caacgttctgcatcagcaccttttacaacttctacgttacaacaagaggcatccaataga
ctaggttattcggtaaccactacgatgagagttgcccaaagactttacgaagaaggatat
attacctatatgagaacggatagcgtaaacctttctcaagaagcaatacaagccgctcaa
caaacaattattaaagaatacggagaagagtactcggctcctagaaattatactacaaaa
aatgcttctgcacaggaagctcacgaggcgattagacctacggactttaaattgaaaact
gtgggagatgctcagttgaataaactgtatcagttgatttacaaaagagcaatggctagc
caaatggcaaacactagaattgaaaaaacaatcattgaaataggcgatgctcaacttcaa
cctcattttgaagcagctggtgaggtaattgtttttgatggtttcttaaaagtgtacggg
attacccaatccgatgaggaggaagaagaaaataatgaaaagcttttacctaaggtttct
ataggagaacatttatcttataaaaatattattgcaacccaaaaatatactaaagcaccc
gctcgttttacggaagcttctttagtaagaaagttggaagaattggggataggaagacct
tcaacctacgcaccaactatacagactattcagaatagagaatatgtagagaaaagagag
gtgttggcaaaagagcgagaaatcattcaattgactttatcaaaagagcttaccaaaacc
gttttaatagaaaaatatggagcggataaaaataagtttttgcctaccgatattggggtg
gtggtgaataactttttggtggagaatttcgctcagattctggactacggatttacagca
agagtagaagaatcttttgatacaattgctgcaggaaaagaggagtggagaactgtaatg
catgatttctacaataaatttcaccctaaaattgtagatgtagaagagaatgcagagcgt
gctacaggagaccatgtattgggggtagaccctaagacaggtaaaaatgtacatgcaaga
ataggtcgttttggacctatggttcagataggagaggtggacgatgaagaaaaaccaatt
tttgcctccttactccctcatcagaatatttcaacgattactttagaagaggctttagag
ctatttaaaattccgtttactcttaatgattatgatggaaaagaagtaatggtaggagtt
ggtcgcttcggcccttatgtgaagtggggagatacttttattagtttgcctaaaggagaa
gatcctcttacggtgaataatgaaagagcgattgagattattgaggaaaagaaaaaggca
gatgctcctattgcaacttataaaggagaagaagtaacaaaaggtgtaggaagatttggc
ccatttttgaagtataaaaatttatacattaatgtttctaagaaatataattttgatgct
ctttctcaggatgatatcgttgaattgatagaagctaaattagaaaaagaagctaaccga
tttatccaacaatgggaagatcataaagtagctttggaaaatggcagatggggacctttt
atccgatttaaaaagaaaatgctgaaaatcccattgaaagcaaaaggggaaaaatacact
gcagaagaccttaaggatattgattttgaaatggtgaaggcttggattatggagcaagat
gaaacagcttttaaggaaaaagcaaaaaagacagctactaagaaaaccactaaaaccaca
acaaagaagacaacaaaaacagctgctaaaaaaacaaaataa
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