Elizabethkingia sp. JS20170427COW: FGE20_06950
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Entry
FGE20_06950 CDS
T06442
Name
(GenBank) DNA helicase UvrD
Organism
elt
Elizabethkingia sp. JS20170427COW
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
HALZ
DUF4286
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCX53489
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Position
complement(1542753..1545908)
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AA seq
1051 aa
AA seq
DB search
MNYYTVINASAGSGKTYTLVKNLLKICLKNDRPELIGNILALTFTNKAAGEMKERILSWL
KDYTSEKYMSNPSLINIQQELKQEGDTLSMDQLRDRSQRLLDYILHHYSTLNISTIDKFN
SRLIRSFALELGLPQNFNLEVDPTPFITEAVEQTLDKIGEDPQISKAFIDYINYNLENDE
KINIQQTLNKKADEYNSDIHYNQLKKNKNFDWDAYTTEKEKLRKEIQQLKKESLQICKAA
QGLIKTQELTTSDFAGGKKNSIAVFFDKFLQKNIPALPSKSEEQATEIFEKGSSSSSKKR
QNEILSILPLLLDSRKRIIRNYIEIEKKKKIHQALLPLKINKEIQDQLKIIEDENDLLLL
SRFNIMINEQLKDEPSAFIYEKIGEKFQHFFFDEFQDTSLLQWQNFVPLRDNALSEADTS
FSIVGDPKQSIYRFRGGDAKIMLDIINKKEITPKYAETIVLGHNYRSSFNIVQFNNELYK
FISTTLDDDYRSIFGESAIQIPHSKNPGRVRVNLIENEKKEQFYIDSCEKMREDIQQCLD
NGYQLSDIAILCRGNHDISEFTSKLSAMQVNYQGKEIFIKTISDSGLTLDLSPTVNATIE
YLKWYIDPKDLQALAFCLYYLNQSGRITMVDFSQEFSELIALDNSEDIIAKIRQLYHLNF
HIDHQNLNTYSFIENVLQNFSVQGEETVYLINFLELLYAYFQNTAANLKDFIQFWKDKGH
QTNIQVSENVDAIQLLTIHKSKGLEFPIVFLPFVYENTDNKIEDWMDVNDEQSALRSVNV
KKFDNSIASYHEDLQEFNTRNIYKNKIDKLCLLYVATTRAVDQMFFYIQKTINPEFEIYN
FINTKKPQHNEEEEQVSENNEDSFDIFPISDIDLLKRKKEEQNSTIEEYHIQSLQPEDTG
ISTEIKIATPSKSYQERNESVKTGIFTHSILEKIITREDAPRVLKQFLLDGTITKEEHQA
IQERISHLFEEHSEYFDGRYTVVNEREILYSQNGESIVLRPDRLMKSPEGWLIIDFKTGA
EHEKYEEQVDTYKKALEAAGEKVWKTEILYL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaactactatactgtaatcaatgcttctgctggttctggaaaaacctatactttggta
aaaaacttattgaaaatttgcttaaagaatgataggcccgagctgattggaaacatccta
gctcttacttttaccaataaagcagcaggtgaaatgaaggaaaggatactttcttggttg
aaggattacacttccgaaaaatacatgagcaacccttccctcatcaacatccaacaagag
ttaaaacaagaaggagatactctaagtatggatcagctaagagatcgctctcagaggttg
ctcgactatattctccaccactactctacacttaacattagtactatcgataaattcaac
tcccgacttatccgatcttttgccttagagcttggacttccccaaaactttaatctagaa
gtagatcctactccttttattaccgaagcagtagaacaaactctagacaagattggcgag
gatcctcagatttccaaagcttttatcgattacatcaactacaacctggaaaacgatgag
aaaatcaacatacaacaaaccctcaataagaaagctgacgaatacaatagcgatatacat
tacaaccaattaaaaaagaacaagaatttcgattgggatgcttatactacagaaaaagaa
aaattgcgaaaagagattcagcaattaaaaaaagaatctctacaaatttgtaaagcagcc
caagggcttataaaaactcaagagctaacaacttccgattttgcaggcggaaaaaagaat
agcattgctgtattttttgataaatttctccaaaaaaatattcctgccttaccttcaaaa
tcagaagaacaggctactgagatcttcgaaaaaggaagtagctcttctagcaaaaaaaga
caaaatgaaatcctcagcattcttcctctacttctagacagccgaaagagaattatccgc
aactatatagaaatcgaaaagaagaagaaaatacaccaagcacttcttcctctaaaaatc
aataaggaaatccaagatcagcttaaaatcatagaagatgaaaacgatttactactgctc
tctcgcttcaacattatgattaatgagcagttgaaagatgaaccttctgcttttatctat
gagaaaattggtgaaaaatttcagcatttcttttttgatgaatttcaagatacttcccta
ttgcaatggcaaaactttgttcctttaagggacaatgcactctctgaagccgacaccagc
tttagcattgtgggagatcctaagcaaagcatctaccgctttagaggtggagatgctaaa
ataatgctggacatcattaacaaaaaagaaattaccccgaaatacgctgagactatagtc
ttaggccacaactacaggagtagttttaatattgtacagttcaacaacgagctttataaa
tttatttccaccacattagatgacgattaccgctctatttttggtgaatctgcaatacag
attcctcattccaaaaatccaggaagagtaagagttaatcttatagaaaacgaaaaaaaa
gaacaattttatatcgacagttgcgaaaaaatgagggaagacattcaacagtgtctcgac
aatggataccaactttctgatattgccatcctatgccggggcaatcatgacatttcagaa
tttacgagtaagctttccgcaatgcaagtaaactatcaaggaaaagaaatatttatcaaa
actatttctgatagtgggcttaccctagatctttccccaacagttaacgccaccatagaa
tatcttaaatggtatatagaccctaaggatttacaagccctagctttctgtctttattat
ctcaaccaatctggaagaataacgatggttgatttttcacaagaattttcagaactaata
gctcttgataatagtgaagatatcattgctaaaatccgacagctgtaccatctaaatttc
catattgatcatcaaaatcttaatacctatagttttatagaaaatgtattacaaaacttt
agtgtccaaggagaggaaacggtttatctcatcaactttttagagcttctgtatgcttac
ttccaaaacacggcggccaatttgaaggactttatccaattttggaaagataaaggtcac
caaaccaacattcaggtttctgaaaatgtcgatgcaatacaacttcttaccattcataaa
tctaagggcttagaatttcctattgtctttttaccatttgtctatgaaaataccgataat
aaaatcgaagattggatggatgttaacgatgagcaatctgctcttaggtctgttaatgtt
aaaaaatttgataacagcatagcctcttatcatgaagatctgcaagaatttaataccagg
aatatttataaaaacaaaatcgacaaactatgtctgctctacgttgccaccactagagct
gtagatcagatgtttttctatatccaaaaaacaatcaaccctgaatttgaaatctacaac
ttcatcaataccaaaaagcctcaacataacgaggaagaagaacaagtttccgaaaacaat
gaggattctttcgacatcttcccaatttctgatatcgatttacttaaacgcaaaaaagaa
gaacagaattccactattgaagaataccacatacaatccttacaacctgaggatactggc
atttctaccgaaataaaaattgccactccatccaaaagctatcaagaacgtaatgaaagt
gtaaaaacaggaatcttcacccacagtattcttgaaaaaatcattactcgagaagatgct
cctagggtgttgaaacaatttttactagacggaaccatcactaaagaagaacaccaagca
atacaggaaaggatttcccacctttttgaagagcattcagaatattttgatggtcgatat
accgtagttaatgaaagggaaatcctatactcccaaaatggtgaaagcatagtccttcgc
ccagatcgactcatgaaatctcctgaaggctggcttattattgattttaaaacaggtgcc
gaacacgaaaaatacgaagagcaagtggatacttataaaaaagctttagaagccgcaggg
gaaaaagtatggaaaactgaaatcctttatttgtaa
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