Elizabethkingia sp. JS20170427COW: FGE20_07080
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Entry
FGE20_07080 CDS
T06442
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
elt
Elizabethkingia sp. JS20170427COW
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elt02000
]
FGE20_07080
Transporters [BR:
elt02000
]
Other transporters
Pores ion channels [TC:
1
]
FGE20_07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QCX53506
LinkDB
All DBs
Position
1566027..1567487
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AA seq
486 aa
AA seq
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MKNLKLGISALALTVASTAFAQTTSNPWLIGVGAHGENHVAQANNFSNTFAARNLTKTLF
NMNNFSITPPLSKLTVARNVNKYFVVDLQASVGNVDNKKFATDKEFFLMAGLGLQFKING
LWNEDSWFDPYLRVGANYLRHDYSGVTFPRTDIHGNIYTEYNGDGDTTGKANHFALATGL
GSNFWITKNFGLGVQGDYVSTPGDKTVVPNFWQASASLLFRFGNRDKDKDGILDKDDRCP
ETPGLAEFQGCPDTDGDGVPDIDDACPDVAGPVENKGCPWPDTDGDGVLDKDDKCVDVAG
PVENQGCPWPDRDGDGVLDKDDKCPDVPGLPQYDGCPPTAERATKELKDILFDFNKATIQ
AGSSAKLDAAAEIIKGAKAENFLVVGHTDAKGNAAYNVKLSRERAASVVKALEARGVAAA
QLKSIGIGAKEATVPATASNEARQVDRKVEVRLISNDTEWSTYKKDDVTVTKPAKKAVKK
TTKKRK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaaaattaggaatttcagcattggctcttactgtagcctctactgcattc
gctcagactacgagcaatccttggttgattggagtaggtgctcatggtgagaatcacgtt
gctcaggcaaacaatttctccaatacatttgctgcaagaaaccttacaaagactttgttc
aacatgaacaatttctctatcactccacctttatctaaacttactgttgcaagaaatgtt
aacaaatactttgtagttgatttacaagcttctgtaggaaatgtagataacaaaaaattt
gctacagataaagaattcttcctaatggcaggtctaggtcttcaattcaaaattaatggt
ctttggaatgaagattcttggtttgacccatacttaagagtaggagctaactatctaaga
catgactattctggagttactttccctagaacagatattcacggtaatatttacactgaa
tacaatggagatggtgatactacaggaaaagcaaaccactttgctttagcaacaggttta
ggatctaacttctggattactaaaaacttcggtttaggtgttcaaggagattacgtatca
actcctggtgacaaaactgtagttcctaacttctggcaagcttctgcatctctattattc
agattcggaaatagagataaagataaagatggtatcttagataaagacgacagatgtcca
gaaactccaggtttagctgagttccaaggatgtccagatactgatggtgatggtgttcca
gatatcgatgatgcatgtccagatgtagctggtcctgttgaaaacaaaggatgcccttgg
ccagatactgatggtgatggtgtattagacaaagatgataaatgtgtagacgtagcaggt
cctgttgaaaaccaaggatgcccttggccagatagagatggtgacggagtattagacaaa
gatgataaatgtccagatgttcctggtttaccacaatacgatggttgtcctccaactgca
gaaagagctactaaagagcttaaagatatcttattcgatttcaacaaagctactatccaa
gctggttctagcgctaaattagatgctgctgctgaaattatcaaaggtgctaaagctgaa
aacttcttagtagtaggtcatacagatgctaaaggtaacgctgcttacaacgttaaatta
tcaagagaaagagctgcttctgtagtgaaagctcttgaagctagaggtgttgctgctgct
caattgaaatctattggtataggtgctaaagaagctactgttcctgcaactgcttctaac
gaagctagacaagtagatagaaaagtagaagttagattaatctctaacgatacagaatgg
tcaacttacaaaaaagatgatgtcactgtaactaaacctgcaaaaaaagcagttaaaaaa
acaactaaaaaaagaaaataa
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