Elizabethkingia sp. JS20170427COW: FGE20_07315
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Entry
FGE20_07315 CDS
T06442
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
elt
Elizabethkingia sp. JS20170427COW
Pathway
elt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGE20_07315 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_07315 (xth)
Enzymes [BR:
elt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FGE20_07315 (xth)
DNA repair and recombination proteins [BR:
elt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FGE20_07315 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
QCX53551
LinkDB
All DBs
Position
complement(1619775..1620539)
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AA seq
254 aa
AA seq
DB search
MKIISYNVNGIRAAFNKDMPKWLASANPDVICFQESKAQPEQIDVAAFEELGYQSFWHSA
EKKGYSGVGIATKIAPKHIEYGTGIDYIDFEGRVIRADFEECSVISVYVPSATNIDRLDF
KMKFCYDFLDYLKELKKEIPNLIVCGDFNICHEEIDIHNPKGLSNTSGFLPIEREYLSIF
LEKGAFTDAFRFMHPETVQYSWWSYRANARANNKGWRLDYTMISNSIQQNITRAVILPEA
QHSDHCPVMVEMSF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattagctataacgtaaacggaataagagctgcttttaataaagatatgccc
aaatggttagcttctgctaaccctgatgttatttgcttccaagagagcaaggcacaacct
gagcagattgatgttgctgcttttgaggagttgggatatcaatctttttggcactccgca
gaaaagaaaggatatagtggtgtaggtattgccactaaaatagctccgaagcatatcgaa
tatggtaccggaatcgattatatagattttgaaggaagggtgattagagctgattttgaa
gaatgctccgtaatttctgtatatgttccttctgctaccaatatcgaccgtttagacttc
aaaatgaagttttgttatgattttctagattatttaaaggaacttaaaaaagaaattccg
aatctcattgtatgtggagacttcaatatttgtcatgaagaaatagacatccataatcct
aaaggtttgtccaatacttctggcttcctacctatagagagggaatatctaagtatattt
ttagagaaaggagcttttaccgatgccttcagatttatgcatcctgaaacggtgcaatac
agctggtggagttaccgcgcaaatgctagagctaacaacaaaggttggcgtttggattat
acgatgataagcaacagtatccaacaaaacattacaagggcggtaattctaccggaagca
caacattccgaccattgccctgtaatggtagagatgagcttctaa
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