Elizabethkingia sp. JS20170427COW: FGE20_08375
Help
Entry
FGE20_08375 CDS
T06442
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
elt
Elizabethkingia sp. JS20170427COW
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_08375
DNA repair and recombination proteins [BR:
elt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FGE20_08375
Archaeal homologous recombinant proteins
FGE20_08375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
Fez1
AAA_21
Clathrin_H_link
ABC_tran
DUF7567
Motif
Other DBs
NCBI-ProteinID:
QCX53742
UniProt:
A0A5B7UH50
LinkDB
All DBs
Position
1866882..1869911
Genome browser
AA seq
1009 aa
AA seq
DB search
MLPLRLTIEGLYSYQERQTIDFTELTEAGLFGVFGQVGSGKSSILEAITYALYGESERLN
ARDKRAYNMMNLKSNRSYLEFDFENHQGKKFRATREFKRNSKNFNDVKPTQSVFYEWENE
EWKPLDHTQAEKILDLTYQNFKRTIIIPQGQFKEFLELGAKDRTEMMKEIFQLHRFDLQN
KVAHLSKSNQSLLDILKGKLLGFEEVSEEKISQLEDEGKGLEELMTEHQQHFIQQQNIYN
HLKNTKGDFDSLSQKKEKYAKLNQEEEKYKLKEKKLEQYEQYYQLFSEKIKLVKDLKIDI
TSKKEECDKHRDTYDDLSKKVRDSKQQLEEWKAQFDALKDRQEEEQDLHHIIKTLEAKKE
IEKLEKRIENGNSIINTTREKCDNIKTEIEGKEKELHKISGEKLDATLLISVEKWFSDRK
NLQNNQKQIQFNILEIEKEISQYQEKLKTSGIASENFEEAYANAEKTIRKQQDEQRVEKG
KLEVQQQIARYADALHDGENCPLCGSKEHPHIIEIDDVSEGISQLEVSLKKLDSELKDWN
TRRDLFREIQQAIALKNGRKTKEEEAMALGEKQLDQHQLLFIWKEFKADQEEEFYLRKEQ
TLVLEKKINLLSEELVKLRKNYEDTFSFLSKYEKGINDLNLSKAKKEGEAQQGKEHLKRI
IWEDYQNSEVDEVRQKAMKLQEFIQSVESQYQKIKEENDVLSQHFSKQKGLLEASEQHLK
DLEAKLQKLQGELQGLLEQQNISLESVENILSENMNVSKERNEIQEFNIEYKTLKNSIQE
LEDKLKGVEYSEEKYLAAQQKYKEQEELLANSRKELLRKQDEINRLKKSYEEKKEVLKEQ
ETLEKRGENLKILNNLFKAQGFVQYVSTIYLRQLCDHANQRFHRMTRNQLSLQINENNDF
EIIDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQAHARSEKNFFFIDEGFGTQDID
SVNLVFETLLNLQKENRIVGIISHVEELKEKIPMSLSIVKDEVRGSIIH
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctttacgacttactatagagggattgtattcctatcaagaaagacaaacaata
gattttaccgaacttactgaagcaggtttgtttggtgtttttgggcaggtaggctcagga
aagtcttctatactagaagcaattacttatgctttgtatggagaatcagaaaggttgaat
gctcgggataaaagggcttataatatgatgaatcttaaatcaaaccgttcttatttggag
tttgattttgaaaatcatcaagggaaaaaatttagagcaacccgagagtttaagagaaat
tccaaaaattttaacgatgtaaagcccacccagtctgttttttatgaatgggaaaacgaa
gaatggaagcctttggatcatactcaggcagaaaaaatactagaccttacttatcaaaat
ttcaaaagaactatcattattcctcaagggcagtttaaggagtttctagagttgggagct
aaggatagaactgagatgatgaaagagatattccagcttcatcgttttgatttacaaaat
aaagttgcccatctcagtaagagtaatcaatctttattggatatcttaaaaggtaaactt
ttaggatttgaggaagtttccgaggagaagataagtcaattagaggacgaggggaaaggc
ttggaggaattgatgacagagcatcaacaacactttatccaacaacaaaatatttataat
cacctaaaaaacaccaaaggtgattttgatagtttgagccagaaaaaggaaaaatatgct
aagctgaatcaagaagaggagaaatataaacttaaagaaaaaaaacttgagcaatatgag
caatactatcaactgttttcagagaaaattaagctcgttaaagatttaaaaatagatata
acatctaaaaaggaggaatgcgataagcatcgtgatacttatgacgatttatctaaaaaa
gtaagggatagtaaacagcaattagaagagtggaaagcccaatttgatgctttgaaggat
aggcaggaagaagaacaagaccttcatcatattattaaaaccttagaggcaaaaaaggaa
atagaaaaactagagaagcgcatagaaaatggaaatagtattattaatactactcgtgag
aaatgcgataatataaagactgagattgagggtaaggagaaagagcttcataaaatctca
ggtgagaagctggatgctacattgttaatatcggtggaaaagtggttctcggataggaag
aatttacaaaataatcaaaagcagatacaattcaacattttggagattgagaaagaaatt
tctcagtatcaagaaaaattaaaaacttcaggtatagcctctgaaaactttgaagaagca
tatgccaacgccgagaaaactattagaaagcaacaagatgagcaaagagtcgagaaaggt
aaattagaagtacaacagcaaatagcccgatatgctgatgctttgcatgatggtgaaaac
tgccctttgtgtggctctaaggaacatcctcatattatagaaatagatgatgtttcggag
ggcatttcccaattggaggtgagtttgaaaaaattggattcagaactgaaggattggaat
acaagaagagatttgtttagagaaatacaacaagcaattgctctaaaaaatggaagaaaa
actaaggaagaagaggctatggctcttggtgaaaaacaattagatcaacatcagttactt
ttcatatggaaggaatttaaagccgaccaagaagaggaattttaccttagaaaagaacaa
actttagtattagagaaaaaaataaacctcttaagtgaagagcttgtaaaacttaggaaa
aattatgaagacacattttcttttttgtccaaatatgagaaaggaattaatgatctgaat
ctttcaaaagcgaaaaaagaaggagaagctcaacaaggaaaagaacacctcaaaaggata
atttgggaagattatcaaaattcagaggttgatgaagtgagacaaaaggcaatgaaactt
caagagtttattcagagtgttgaaagtcaatatcaaaaaattaaggaagaaaacgacgtt
ttatctcagcatttctcaaaacaaaaaggcttgttagaagcaagtgaacaacatctgaaa
gacttggaagcaaaactgcaaaagttgcaaggtgagttacaaggcttattagaacagcaa
aatataagcttggagagtgtagaaaatattttatctgaaaatatgaatgtttctaaagag
agaaatgaaattcaggaatttaatattgaatacaaaacgcttaaaaatagcattcaagag
ttagaggataagctaaaaggtgtggaatatagcgaggaaaaatatctagccgcccaacag
aaatataaagagcaggaagaactgttggctaattctcgcaaagagctgcttaggaagcaa
gatgaaattaaccgcctaaaaaaatcttatgaagagaaaaaagaagtcttaaaagaacaa
gaaactttggaaaagcgaggagaaaatctaaaaatattgaataatctcttcaaagcccaa
ggtttcgttcagtatgtttctacaatttatttgaggcaactttgcgaccatgccaaccaa
aggtttcataggatgaccaggaaccagctgagcttacagattaacgaaaataatgatttt
gaaattatagactacctcaatgaaggaaagagcagaagtgtgaaaactctttctgggggg
caggcttttcaggtttccttaagtttggcattggcattggcagagagtgtccaagctcat
gctcgttcggaaaaaaacttttttttcattgatgaaggctttggtactcaggatatagat
tcggtaaatttagtttttgaaactttattaaaccttcaaaaagaaaaccggattgtaggc
attatctcccatgtagaagagctgaaagagaaaatacccatgtctttaagcattgttaaa
gatgaggtaagaggaagtataattcactaa
DBGET
integrated database retrieval system
