Elizabethkingia sp. JS20170427COW: FGE20_10960
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Entry
FGE20_10960 CDS
T06442
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
elt
Elizabethkingia sp. JS20170427COW
Pathway
elt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGE20_10960 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_10960 (uvrA)
DNA repair and recombination proteins [BR:
elt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGE20_10960 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGE20_10960 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_21
AAA_25
AAA_15
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
QCX54223
UniProt:
A0A5B7UIE7
LinkDB
All DBs
Position
complement(2437933..2440758)
Genome browser
AA seq
941 aa
AA seq
DB search
MGNTDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETF
SAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTSKNPRSTVGTVTELYDFLRLLFARVSD
AYINGSDEKMVGYNEEQILERIKTLYTGEKIYLLSPVVRSRKGHYRELFVNYSKKGYLQA
RVDGEIIDIEPDLKLDRYKTHDIEIVVDRLIIGEAASEARIEKSLNTALQLGDGVIIVQK
PGDTHFKFFSKNLMDPYSGASIPLPEPNTFSFNSPKGSCPTCKGLGNIKKINTDIFVEEP
KKSVSQGALLPLEELKNNKYLISQIKAVLEFHDLSLSTPFQEWSPEVIHAVYYGFHKEVV
KELKLAGISKKIKIHFEGLVPYLQQVIEEKESYDATLIERHFTSDEVCPECKGARLQASS
LQFKINHKNIAEIASLSLSELYQWVSQIQDQFSEKKKVIAQEILKEIQTRLGFLLNVGLD
YLSLNRATRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKNLRD
IGNSVLVVEHDKDMILEADYVLDIGPRAGKFGGEVLWQGKPKDLKKANTITADYLTGKRA
IEIPETRRTGNGKSIILKGATGNNLKNVTLEIPLGKMVVVTGISGSGKSSLINGTLYPIL
NRHFYRSVQEPLPYKSIEGIENIDKIVDVDQSPIGRTPRSNPATYTGVFTDIRNLFAQLS
ESKIRGYKPGRFSFNVKGGRCETCQGAGLKLIEMHFLPDVYVHCETCNGKRFNRETLEVR
YKGKSISDVLDMTINEAVDFFQVYPKIFAKVKTMQDVGLGYITLGQQSTTLSGGEAQRIK
LATELAKKQTGNTLYILDEPTTGLHFEDVKVLLKAINQLVEMGNSFIIIEHNMDVIKVAD
HIIDVGPEGGKRGGEIIATGTPEEIIKNKKSLTGKFLKKEM
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacagattttattgaagtttacggtgctcgggagcataatctaaaaaatata
gacgtaaaaatcccacgcaatgagttggtggttataacaggcttatcaggaagtggtaaa
tcctctttagcttttgatacgatctttgccgaaggacaacgccgttatattgaaaccttt
tcagcatatgcccgtcaatttttaggaggtttagaacgtcctgatgtcgataaaatagaa
ggtttatctcctgttattgccattgaacagaaaacaacttctaaaaacccacgttccact
gtagggacggttaccgagttatatgattttctcagacttctttttgcaagagtctcagat
gcatatatcaatggttccgatgagaagatggtcggctataacgaagaacaaattttagaa
agaataaaaacgctttatacaggagaaaaaatatacttactctctcctgttgtccgatca
agaaaagggcattatcgggaactttttgttaactattccaaaaaaggatacttacaagcc
cgtgtagatggcgaaattatcgatatagaaccagatctaaaactagaccgatacaaaact
catgatattgagattgttgtggacagactcatcattggtgaagctgcatcggaggctaga
attgaaaaatccctgaacacggctctacagctaggagatggtgtaattatagttcaaaaa
ccaggagacacccattttaagtttttcagtaaaaacttaatggatccttattcgggggca
tctatcccattgccagaacctaatactttttcctttaattcccctaaaggaagctgccct
acttgtaaaggattaggaaatatcaaaaaaattaacaccgatatctttgttgaagaacct
aaaaaatcagtttcacaaggagctttacttccgctggaagaactgaaaaacaacaagtat
ctaatctcccaaattaaagctgtattagagtttcatgatttatcactatccacacctttc
caggaatggtccccagaggtcatccacgccgtgtactatggctttcataaggaagtggtt
aaagaattgaagctggcaggaatttcaaaaaaaataaaaatccattttgaaggattagtt
ccttatcttcaacaagttatagaagaaaaagaaagctatgatgccacgcttatcgaaaga
catttcaccagcgatgaagtatgcccagaatgcaagggagctcgcctacaagcaagtagc
ttacaatttaaaataaaccataaaaatattgccgaaatagcttctctttcgctatccgaa
ttgtaccaatgggtaagccaaatacaagaccaatttagcgaaaagaaaaaagttattgcc
caggaaattttaaaagaaatacaaacgcgccttggatttttacttaatgtaggtttagat
tacctaagccttaatcgtgccacaagaaccctttctggcggggaatctcaaaggataaga
ttagccacacaaattggctctcagttggtgaatgtactttacattttagacgaaccttcc
atcgggcttcaccaaagggataacgagagacttatcaattctctaaaaaaccttcgagat
atcggaaactccgtacttgtggtagagcacgataaggacatgatattagaagctgattat
gttttggatataggcccacgagcaggaaaatttggtggagaagtgttatggcaaggaaaa
cctaaagatctaaaaaaggctaataccattaccgcggattaccttacaggtaaaagagct
atcgaaatccccgaaaccagaagaacaggcaacgggaaatctatcatcctaaaaggagct
acaggtaacaatttgaagaatgtaaccctagaaatccctttgggtaaaatggtagtggta
accggtatttcaggaagtggaaaatcatctctcattaacggaacactttaccctattctt
aatcgacatttttatcgcagtgttcaagagcctttaccttataaaagtatcgaaggaata
gaaaatatagataaaatagtagatgtagaccaatcccctatcgggagaactcctcgatct
aatcctgcaacatatacaggagtttttaccgatatccgaaatctattcgctcagttatca
gaatctaaaatccgagggtacaaacctggaaggttctcttttaacgttaaaggaggaaga
tgcgaaacttgccaaggagcaggccttaaattgatagaaatgcacttccttcctgatgta
tatgtacattgtgaaacttgtaatgggaaaagatttaacagagaaactctagaagtaaga
tacaaaggaaaatctatttctgatgtattggatatgacgattaatgaagcggtagacttc
ttccaagtctatcctaagatttttgcaaaagtaaaaacaatgcaagatgtaggtttagga
tacatcacgctaggacagcaatctacaactctttctggtggagaagcccaaagaataaaa
ttagcaaccgaacttgccaaaaaacaaacaggaaatacattatatatcttagatgaacca
acaacaggtttgcattttgaagacgtaaaagtattgttaaaagccattaatcaactcgta
gaaatggggaactcttttatcattatcgaacacaatatggatgtgataaaagttgccgac
cacattattgatgtaggtcctgaaggtggcaaacgaggtggtgaaattatcgctactgga
actcccgaagaaatcattaaaaacaaaaaaagcttaactggaaaattcctgaaaaaagaa
atgtaa
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