Elizabethkingia sp. JS20170427COW: FGE20_11100
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Entry
FGE20_11100 CDS
T06442
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
elt
Elizabethkingia sp. JS20170427COW
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_11100
Enzymes [BR:
elt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGE20_11100
DNA repair and recombination proteins [BR:
elt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FGE20_11100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QCX54246
UniProt:
A0A5B7UIM2
LinkDB
All DBs
Position
complement(2477994..2480735)
Genome browser
AA seq
913 aa
AA seq
DB search
MSEIQEHSFLTKIVEHILTSGKPLQHYTIVLPGKRPAVFIKRILSHKNYRGILPKFITID
ELITEISALQSISGIPLWLLSYKVYQDSGVQQESLQNFLKWYPTLLKDWDDILKFTEDGD
KVLDFMHSDERIKNWGETLGEDQLRKKHYTFWKKANTFLPALKQSLLKEGLGTSGIIHEK
VKKEVNLFIEKTEDFFLFCGFNAFTLLEKKLIKGLLQAGKADCFFQADRYYFDDTKQEAG
KFLRENSKWKEFNDQHPFSWIDQHFEEEKNIEVYEVSGNIAQTKVLPQVLKNLQQDNKEL
SHTAIVLMDENILPPTLASIKSTVKSLNITMGFPLKNLSFSIAMKKLFYLQKQLMKSRSS
YYHADLTPILEEMPANDEDLEIIRVFIKKIKEKNMVYISSEDFKNLLGGLSYFNLLCKPN
SAIEYLEALINFCKNSKLQKISDIDFENISSFESAFVSLRNQLLQYNFLIEIETLEVLIH
QMVSSETIDFEGEPLSGLQVMGLLETRLLNFENIILLSVNEGKIPLGRSQNTYLPFDVRR
KFGLNTYLENDSIYAYHFYRLIQEAKNVHIVYNGLSSGLNTGERSRFVTQIEMESSHTIH
NHVVESVSQPIEDQPIEFSKSDFVKAKLAEWKNRISPSHLTSYLYNPVNFYLQKILGLTD
QEELEEEVTSRNYGNLVHYTLEKIYSQLLNKKLEARDIIPLKAKIEDYLNEVIVQKMNNS
LSYYDKGMNYIHKTIAKKTIENILQYDIDALEAGSNLEILAIEKQLKGDFQLSKDEKVSF
YGYADRIDRMDGVLRILDYKTSDIKYISMKNDGKSDINTVLNDEKYKQLIQLAIYSYCIL
QDPEIKDGEVQCGIWSFKKPSNGPGFLSIDGCEFIDTQNIQLPMLSIRTIIKEILNPDID
FIEKKRKDSFFNI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatccaagaacatagcttcttaaccaagattgtagagcatatcctaacttca
ggaaagcctcttcagcactataccatagtattaccagggaaaaggcctgcggtatttatc
aagagaattttatctcacaaaaactatagaggaattctaccaaaattcatcacaattgat
gagttgattaccgaaatatccgcactacaatctatttcagggatccctttatggctactg
tcgtataaagtttatcaagactcgggagtacaacaggaaagccttcagaatttcctaaaa
tggtatcctactttattgaaagattgggatgatattctaaaattcacagaagatggagat
aaggttttggacttcatgcattccgatgaaaggataaaaaactggggagaaaccttagga
gaagaccagttgagaaagaaacattataccttctggaaaaaagccaatacttttctccca
gctctaaagcaatctcttttgaaagaaggcttaggaacttctggaattatccatgagaaa
gtgaaaaaagaggtaaatctttttatagaaaaaacagaagatttcttcttattctgtggg
tttaatgcatttactttgctcgaaaaaaagctgattaaaggccttttacaagctgggaag
gctgattgctttttccaagcagaccgatattattttgatgataccaaacaagaggcagga
aagtttttaagagaaaactccaagtggaaggagtttaatgaccaacatcctttttcttgg
atagatcagcattttgaagaggaaaagaatatagaagtttatgaagtttctgggaatata
gctcaaaccaaagtattgcctcaagttcttaaaaaccttcagcaggacaataaagagctt
agccataccgccattgttttgatggatgaaaatatccttcctcctaccttggctagtatt
aaaagcacagtaaaaagcctcaatattaccatgggctttccgctgaagaacttgtccttt
agcattgcgatgaagaagcttttctatcttcagaaacagctgatgaagagtcgctcttcc
tattaccatgcagaccttactcctatcttagaagagatgcctgcaaatgatgaggatctt
gaaatcattagggtatttatcaagaagataaaagaaaaaaatatggtttatatttcttcc
gaagattttaaaaacctattgggaggtctttcatatttcaatcttttatgcaaacccaac
tcagctatagaatatctagaagcccttatcaacttttgtaaaaacagcaaattacaaaag
atatcggatatcgattttgagaatatttctagttttgagagcgctttcgtgagtttaaga
aatcaactattacaatataacttcttaatagaaatagaaactttagaagtcttaatccac
caaatggtaagctctgaaacgatagatttcgagggagaacctctttcaggacttcaggta
atgggacttttagaaacacgtttgctgaattttgaaaacattattctattatcggtaaac
gaagggaaaatacctctaggaagaagccaaaacacctatttgcctttcgatgtacgaaga
aaatttggactaaatacctacttagaaaacgattctatttatgcctatcacttttaccgc
ttaattcaagaggctaaaaatgtacatattgtttataatggattaagttcaggattaaac
acaggggaaagaagtagatttgtaactcaaatagaaatggaaagctctcataccattcac
aatcacgtggtagaaagtgtttctcagccaatagaagatcaacctatagaatttagtaaa
tccgattttgtaaaagctaaattagcagaatggaaaaacagaatatctccttctcacctt
acttcatatctttataatcctgtaaatttttatcttcaaaaaattctgggattaaccgat
caagaagaattggaagaggaagttacttctcgtaattatgggaatctcgttcactatact
ttagaaaaaatctattctcaactattaaataaaaaacttgaagctcgagatattattcca
ttaaaagctaaaattgaagactatcttaacgaggtaattgtccagaagatgaataattcc
ttatcttattatgataaagggatgaattatattcataaaaccattgcaaaaaagacaata
gaaaatatccttcaatatgatattgatgctttggaagctgggagtaatttagaaatttta
gccatagaaaaacaattaaaaggtgattttcaactttctaaagacgagaaggtttccttt
tatggttatgcagatagaatcgatcgtatggatggggttttaagaattctagattataaa
acttctgatattaaatatatttccatgaaaaatgatgggaaatctgatattaatacagtc
cttaatgatgaaaaatacaagcagctaatacaacttgcaatctactcttattgtatttta
caagaccctgaaataaaggatggggaagtgcaatgtgggatttggagctttaaaaagcct
agcaatggccctggttttttatcaattgatggatgcgagtttatcgatactcaaaacata
caattacccatgttatctataagaactattattaaagaaatactaaatcccgatatagat
tttatagaaaaaaaacgaaaagattctttttttaatatataa
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