Elizabethkingia sp. JS20170427COW: FGE20_11285
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Entry
FGE20_11285 CDS
T06442
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
elt
Elizabethkingia sp. JS20170427COW
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elt03009
]
FGE20_11285
Enzymes [BR:
elt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FGE20_11285
Ribosome biogenesis [BR:
elt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FGE20_11285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
GAS
HSD_C
DUF6831
G5
Motif
Other DBs
NCBI-ProteinID:
QCX54279
UniProt:
A0A5B7UIL0
LinkDB
All DBs
Position
complement(2526931..2528073)
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AA seq
380 aa
AA seq
DB search
MSRERKNFSNKPNNGRPGGQKPSFGKPSRSTSNDRRSNERSSDSRDRFESSDRKSSFGKS
SRPNFSDNTQNKDRSFPFGKPSFASKGKKGGRDFDTRDKYENGDRKYVASKSYKKPYDRQ
AEQNDKIKGYILKRKLDKLSQQQERDTIRLNKYIANSGICSRREADELITQGLVEVNGKV
VTEMGYQVQKTDRVVFDGQGITPEKPVYVLLNKPKGYISTTKDEKMRKTVMDLVANASPY
RLYPVGRLDRSTTGVILLTNDGHLTKKLTHPSFNMKKIYHVTLDKKVSSADLEEIRKGIR
LEEGVAEVDNVSFIEGKPKNEVGIEIHIGWNRVVRRIFQRLGYEVEALDRVMFAGLTKKN
VKRGHWRILNDLEVNNLKML
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagaacgcaaaaatttttcaaataagccaaataacggtaggccgggtggtcag
aagccttcatttggcaaaccttcccgttccacttctaatgatagaagaagtaatgagcgt
agctccgattctcgtgatagattcgaaagctccgatcgtaagtcgtcttttggcaagtcg
tctcgcccaaactttagtgacaatacccagaataaagatcgctctttcccttttggaaag
ccttcatttgcctctaaagggaaaaaaggaggtagagattttgatacccgagataagtat
gaaaatggggatcgtaagtatgtagcatcaaaatcttataagaaaccttacgacagacag
gcagagcaaaatgataaaattaaaggatatatcttaaaaagaaaattggataaactctct
caacagcaagaaagggataccattcgtcttaataaatatatcgctaattcaggaatttgt
agccgccgtgaagccgatgagttaattacccaaggtctagtagaagtaaatggtaaagta
gttaccgaaatgggataccaagtacaaaaaactgatagggtagtttttgatggacagggc
attactcctgaaaaaccagtatatgtacttttaaacaaacctaaaggttatatttctact
accaaagatgagaagatgagaaaaacggttatggatttggttgctaacgcttctccatat
cgtttgtatcctgtgggtaggttagacagatccaccactggagttatcttgctaaccaat
gatggtcacctcaccaaaaaacttactcacccttcattcaacatgaagaaaatatatcat
gttaccctagataaaaaggtgagctcagcagatttagaggaaataagaaaaggaatccgt
ttggaggaaggtgttgctgaagtagataacgtatcttttattgaaggaaaaccaaaaaat
gaagtaggaattgaaatccatattggttggaaccgtgtggtaagacgtattttccaaaga
ttaggatatgaagtggaggctttagacagagtaatgtttgcagggcttaccaagaaaaat
gtgaaaagaggacattggagaatcctgaatgacttagaagttaacaacttgaaaatgtta
taa
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