Elizabethkingia sp. JS20170427COW: FGE20_11345
Help
Entry
FGE20_11345 CDS
T06442
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
elt
Elizabethkingia sp. JS20170427COW
Pathway
elt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGE20_11345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elt03019
]
FGE20_11345
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_11345
Enzymes [BR:
elt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGE20_11345
Messenger RNA biogenesis [BR:
elt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGE20_11345
DNA repair and recombination proteins [BR:
elt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGE20_11345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Internalin_N
FANCI_HD1
DUF4854
Motif
Other DBs
NCBI-ProteinID:
QCX54291
LinkDB
All DBs
Position
complement(2541097..2543304)
Genome browser
AA seq
735 aa
AA seq
DB search
MNTKSANLAGSLKKYFGFSTFKGYQEQIITSLLEGNDVFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAINGLFSDDGVAHVLNSSLNKTQTKAVMDDIRSGKTKLLYVA
PESLIKDEYIDFFKEVAISFFAIDEAHCISEWGHDFRPEYRNLKTIIEKIAKVPIIALTA
TATPKVQDDIQKTLGMNKALVYKASFNRPNLFYEIRPKVNVDKEIVKFIKTKPGKTGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDAKTRVANQDKFLMEDMDVIVATIAFGMGIDK
PDVRYVIHYDIPKSLESYYQETGRAGRDGGEGHCIAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYLLYYFGESFDPVNGLGAQMDDNALNPPVLKDATKDLKKV
LELVRDLGQKFRSKDLVTVLVGKETAVTKSYKLENNEYFGSGKKHGDNYWKSIFRQAVVQ
DFLIKDIETYGVLKISEKGWNCLEHDDCPKFEIAEDRVYNLAESVKSAAEASLSNAAKGM
DDVLLSQLKDLRKKVAKKHQIPPYTVFQDPSLEDMTVQYPISIAEISKIYGVGEGKARKF
GKEFADFIGKYVEVNDILRPDDMVLKQVANKSSHKVFIIQSTDKKIDLEDIAKAKNLSME
DLLSEMEGIVYQGTKLNIDYYIDENFDEDIVEEFMEYMMESESDSMKTLCAEFSDDLSDE
EIRILRIKFISDVAN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaatctgcgaacctagcgggatcattgaaaaagtactttggattttcaact
tttaaaggatatcaagaacaaataattacttcattattagaaggtaacgatgtttttgta
ctgatgcccacaggaggaggaaaatctttatgctaccaattgcccgctcttattagcgaa
ggtacagctattgtggtatccccactaatagctttgatgaagaaccaagtggacgctatt
aacggattgttttctgatgatggcgttgctcatgtgttgaattcgtctctgaataaaaca
caaaccaaagccgtaatggatgatatccgtagcggaaaaacaaaactgttatatgtagct
cctgaatctttaattaaagatgaatatatagacttctttaaagaggttgccatttcattt
tttgcgattgatgaagctcactgtatttcggaatgggggcatgacttccgaccggaatat
agaaacctgaaaacaattatcgagaaaattgctaaagtcccaattatagcccttacagca
actgcaactcctaaagttcaagatgatattcagaaaactctagggatgaataaggcttta
gtgtacaaagcttctttcaacagacctaatttgttttatgaaatccgaccgaaggttaac
gtagataaagaaattgttaagtttattaaaaccaaacctggtaaaacaggtattgtatat
tgtttaagtagaagaaaagtagaggagtttgcccaacttctacaagtaaacggaattaat
gcattaccttatcatgcaggcttggatgctaaaacgagagttgccaatcaggataaattc
ttgatggaagatatggacgttattgtagctaccattgcttttggtatgggaatcgataaa
cccgatgtgcgatatgtcatccactatgatattcctaaaagtttagaaagctattatcaa
gaaaccggtagagctggtcgtgatggaggagagggacactgtatcgctttttatgatcct
aaagatattgaaaaactcgagaaattccttgcccagaaaccagtttctgaaagagaaatt
ggcttacagctattgaatgaagttgtgggatatgtagaaacatcgatgagtaggagacaa
tacttgctttattattttggagaaagctttgaccctgttaatggattgggagctcagatg
gatgataatgcccttaaccctcctgtactgaaagatgcaactaaagatctgaaaaaggtg
ctagaattggtaagagatttaggacagaaatttagatccaaagatttagttacagtttta
gttggaaaagaaacagcggttaccaaatcctataagttggagaataacgaatactttggc
agcggaaaaaaacacggcgataactattggaaatctatttttaggcaagccgtagtacaa
gacttccttattaaggatattgaaacgtatggcgttttaaaaatttcagaaaaaggatgg
aattgtttagagcatgacgattgtccaaaatttgaaattgcagaggatagagtgtataac
cttgccgaatctgtaaaatcagcagcagaggctagccttagtaatgctgcaaaaggtatg
gatgatgtgctattatcacaattaaaagatttaagaaagaaagtagcaaagaaacatcag
atacctccttacaccgttttccaagatccaagtttggaggatatgacggtacaataccca
atcagcattgctgaaatctccaaaatatatggagtaggagaaggtaaagcgagaaaattt
gggaaagagtttgcagactttatcggaaaatatgtggaggtaaatgatattctccgccca
gatgatatggttctaaaacaagttgccaataagtctagccataaagtgtttatcatccaa
agtacagataaaaaaattgacttagaagacattgcaaaggctaaaaatttgagcatggaa
gatcttctttccgaaatggaaggtattgtttatcaaggaacaaagttaaatatcgactac
tatattgacgaaaattttgacgaagatatcgtagaagaatttatggaatatatgatggaa
tccgaatccgacagtatgaaaaccctttgtgcagaattttcagatgacctaagcgatgag
gaaatcagaatattgagaattaaatttattagtgacgtagccaattaa
DBGET
integrated database retrieval system
