Escherichia coli UM146: UM146_09525
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Entry
UM146_09525 CDS
T02000
Name
(GenBank) outer membrane usher protein FimD precursor
KO
K07347
outer membrane usher protein
Organism
elu
Escherichia coli UM146
Pathway
elu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UM146_09525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elu02000
]
UM146_09525
02044 Secretion system [BR:
elu02044
]
UM146_09525
02035 Bacterial motility proteins [BR:
elu02035
]
UM146_09525
Transporters [BR:
elu02000
]
Other transporters
Pores ion channels [TC:
1
]
UM146_09525
Secretion system [BR:
elu02044
]
Chaperone-usher system
Type 1 pilus assembly protein
UM146_09525
Bacterial motility proteins [BR:
elu02035
]
Pilus system
Fimbrial proteins
UM146_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
PEGA
Motif
Other DBs
NCBI-ProteinID:
ADN71288
LinkDB
All DBs
Position
1992852..1995503
Genome browser
AA seq
883 aa
AA seq
DB search
MTAFRAAFKAYRMHQVLILPRFARLTFALGLATAVFPVDAEYYFNPRFLSNDLAESVDLS
AFTKGREAPPGTYRVDIYLNDEFMASRDITFIADDNNADLIPCLSTDLLVSLGIKKSALL
DNKEHSADKHVPDNSACTPLQDRLADASSEFDVGQQHLSLSVPQIYVGRMAHGYVSPDLW
EEGINAGLLNYSFNGNSINNRSNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYNSGSS
NSSDSNKWQHINTSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQH
GFAPVIHGIARGTAQVSVKQNGYDVYQTTVPPGPFTIDDINSAANGGNLQVTIKEADGSI
QTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSTPKFVQASLMHGLKGNWTPYGGMQ
IAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADDTRHSGQSVKFVYSKSFYQTGTNIQ
VAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDTSEQTLFIDYFNLFYSKRGQEQISISQ
QLGNYGTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLA
FTLNVPFSHWMRTDSQSAFHNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGN
TQGGNTSSGTSGYSSLNYRGAYGNTNVGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLG
DTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETV
VTVIPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLT
GLPQSGKLQVSWGKDKNSNCIVDYKLPVVSPGTLLNQQTAICR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgacagcctttcgtgccgcatttaaggcatatcgtatgcatcaggtgttaatactgcct
cgctttgcacggcttacctttgcccttggcttagcaactgcggtttttcccgttgacgca
gagtattattttaatccacggtttttaagcaatgaccttgctgaatctgtcgatttatct
gcctttactaagggacgcgaggccccacctggtacatatcgggtcgacatttatttgaac
gacgaatttatggctagtcgggatattacttttattgcagatgataataacgcagatctc
atcccatgcctgagtacagaccttcttgtcagtcttggcataaaaaaatcagcattatta
gacaacaaggaacattcggcagataaacatgtgccggacaacagcgcatgcacaccactt
caggatcgtttggctgatgcatcatctgagtttgatgttggtcagcaacatctgtcactc
tccgttccgcaaatatatgtcggcagaatggctcacggctatgtttctcctgatctgtgg
gaagaaggaataaatgcagggctactaaactatagttttaatggtaattctattaataac
cgtagtaaccataatgcaggaaaatccaactatgcatatttgaatttacagagtggcatc
aacattggtagttggcgactgcgcgataactcaacgtggagttataacagtgggagtagc
aattcatctgacagcaataaatggcagcatatcaatacgtcggctgaacgtgacattatt
ccgttacgctcacggttaacagtgggtgatagttataccgatggcgatatttttgacagt
gtgaactttcgtggccttaaaataaattcaacagaagcgatgttgcccgatagccaacat
ggtttcgctccggtgattcatggtattgctcgtggcaccgcacaagtgagtgtaaaacag
aatggatacgatgtttatcagactactgtcccacccggcccttttactattgatgatatc
aactctgcggccaatggtggtaatctgcaagtaaccataaaagaggcagacggcagtatt
cagacattatatgttccttattcgtctgttccggttctccaacgtgctggatatacgcgt
tatgcacttgccatgggggaatatcgtagtggaaataacctgcaaagcacccccaagttc
gtacaagcaagcttgatgcatggtctgaaaggaaactggacaccttatggcggaatgcaa
attgcagaagattatcaggccttcaaccttggtattggtaaagatttaggactttttggt
gccttttctttcgatattacgcaggccaatacgacacttgcagatgacacccgtcacagc
ggacaatcggttaaattcgtctacagcaaatccttctaccagacgggaaccaatatccag
gtcgcaggatatcgctattctacgcaaggtttttataacttatccgacagtgcatacagt
cgaatgagtggttacaccgtcaagcctcctaccggagacaccagtgagcagacactattt
attgattattttaatctgttctacagtaagcgtggtcaggaacaaataagcatctctcag
cagcttggaaattatggtacgacatttttcagtgccagtcgccaaagttactggaacacg
tcacgcagcgaccagcaaatatcatttggattaaatgtgccgtttggtgatattacgact
tcgctgaattacagctattccaataatatatggcaaaacgatcgggatcatttactcgct
tttacgcttaatgttccctttagtcattggatgcgtacagacagtcagtcggcatttcat
aattcaaacgccagttacagtatgtcaaacgatttgaaaggcggcatgaccaacctatca
ggggtttatggcactctgctaccggataataacctgaattatagtgttcaggtcggtaac
acccaagggggtaatacatcgtctggcaccagtggttacagttctcttaattatcgtggt
gcttacggtaatacgaatgtcggttacagtcggagtggtgacagcagccagatttattac
ggaatgagtggtgggattattgctcatgctgatggcatcacctttggacagccgctgggc
gacacaatggttctggttaaggctcctggcgctgataatgtcaaaatagagaaccagacc
ggaattcataccgactggcgtggctatgccatattaccatttgcgacagaatatagagaa
aatcgtgtcgctcttaacgcgaattcccttgcagataatgttgaactggatgaaaccgta
gtcactgtcatcccaactcacggtgctattgccagagcaacatttaatgcacaaatcggc
gggaaagtattaatgacgttgaagtacggtaataaaagcgttccattcggtgcaattgtc
actcacggagagaataaaaatggcagcattgtcgcggaaaatggtcaggtttatctgact
ggacttccacagtcagggaaattacaggtttcatggggcaaagataaaaactcaaactgt
attgtcgattacaagcttcctgtagtctctcctggaaccttgctgaaccagcagacagca
atctgtcgctaa
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