Escherichia coli UM146: UM146_12490
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Entry
UM146_12490 CDS
T02000
Symbol
pgaA
Name
(GenBank) outer membrane protein PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
elu
Escherichia coli UM146
Pathway
elu02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
UM146_12490 (pgaA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_2
TPR_1
DUF6323
Motif
Other DBs
NCBI-ProteinID:
ADN71867
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Position
2563440..2565863
Genome browser
AA seq
807 aa
AA seq
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MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIEARKGNTQPALLWFAQK
SALSNNQIADWLQIALWAGQDKQVITVYNRYRHQQLPARGYAAVAVAYRNLQQWQNSLTL
WQKALSLESQNKDYQRGQILTLADAGHYDSALVKLKQLNSGAPDKANLLAEAYIYKLAGR
HEDELRAMTGSLPENALTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSF
MPTRSESERYAIADRALAQYAALEILWHDNSDRTAQYQRIQVDHLGALLTRDRYKDVISH
YQRLKNTRQIIPPWAQYWVASAYLKEQQPKKAQSIMTELFYHKETIAPDLSDEELADLFY
SHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQGHSFLSTVAKYSNDLPQA
EMIARELAYNAPGNQGLRIDYASVLQARGWHRAAENELKKAEVIEPRNINLEVEQAWTAL
TLQEWQQAAVLTHDVVEREPQDPGVVRLKRAVDVHNLAELRIAGSTGIDAEGPDSGKHDV
DLTTIVYSPPLKDNWRGFAGFGYADGQFSEGKGIVRDWLAGVEWRSRNIWLEAEYAERVF
NHEHKPGARLSGWYDFNDNWRIGSQLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRK
YGVSWAFTDFSDSNQRQEVSLEGQERIWSSPYLIVDFLPNLYYEQNTEHDTPYYNPIKTF
DIVPAFEASHLLWRSYENSWEQIFSAGVGASWQKHYGTDVVTQLGYGQRISWNDVIDAGA
TLRWEKRPYDGDREHNLYVEFDMTFRF
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaagtagcagaaaaaggtgcccgaaaaccaaatgggctttgaaacttcttact
gccgcatttttagcagcgagtcccgcggcgaagagtgctgttaataacgcctatgatgca
ttaattatcgaagctcgcaagggaaatactcagccagctttgttatggtttgcacaaaaa
tcagcactcagtaataaccaaattgctgactggttacagattgccttatgggccgggcaa
gataaacaggttattaccgtttacaaccgctaccgtcatcagcaattaccagcgcgtggt
tatgcagctgtcgccgtcgcttatcgtaacctgcaacaatggcaaaactcgcttacactg
tggcaaaaggcactctctctggagtcgcaaaataaggattatcaacggggacaaatttta
accctggcagatgcgggtcactatgattctgcgctggttaaacttaagcagcttaactct
ggagcaccggacaaagctaatttactcgcagaagcctatatctataaactggcggggcgg
catgaggatgaattacgggcgatgacagggtcattacctgaaaatgccttaacgcaacaa
tatcccacagaatacgtgcaggcattacggaataatcaacttgctgccgcgattgacgat
gccaatttaacgccagatattcgcgctgatattcatgccgaactggtcagactgtcgttt
atgcctacgcgcagtgaaagtgaacgttatgccattgccgatcgcgccctcgcccaatac
gctgcattagaaattctgtggcatgataactcagaccgcactgcccagtaccagcgtatt
caggttgatcatcttggcgcgttattaactcgcgatcgttataaagacgttatttctcac
tatcagcgtttaaaaaatacgaggcaaattattccgccctgggcgcaatattgggttgcg
tcggcttatctcaaagaacagcagccaaaaaaagcacagtcaataatgacagagctcttt
tatcacaaggagaccattgccccggatttatccgatgaagaacttgcggatctcttttac
agccacctggagagtgaaaattatcccggcgcgctaactgtcacccaacataccattaat
acttcgccgcctttccttcggttaatgggcacgcctacgagcatcccgaatgatacctgg
ttacaggggcattcgtttctctcaaccgtagcaaaatatagtaatgatcttcctcaggct
gaaatgatagccagagagcttgcttataacgcaccaggaaatcagggactgcgcattgat
tacgcgagtgtgttacaagcccgcggttggcatcgtgcagcagaaaatgaattaaaaaaa
gcagaagtgatcgagccacgtaatattaatctggaggttgaacaagcatggacagcatta
acgttacaagaatggcagcaggcagctgtcttaacgcacgatgttgtcgaacgtgaaccg
caagatcccggcgttgtacgtttaaaacgtgcggttgatgtacataatcttgcagagctt
cgtatagctggttcaacaggaattgatgccgaaggcccggatagtggtaaacatgatgtc
gacttaaccaccatcgtttattcaccaccgctgaaggataactggcgcggttttgctgga
ttcggttatgccgatggacaatttagcgaaggaaaagggattgttcgcgactggctggcg
ggtgttgagtggcggtcacgtaatatctggctcgaggcggagtacgctgaacgcgttttc
aatcatgagcataaacccggcgcgcgcctgtctggctggtatgattttaatgataactgg
cgtattggttcgcaactggaacgcctctctcaccgcgttccattacgggcaatgaaaaat
ggtgttacaggcaacagtgctcaggcttatgttcgctggtatcaaaatgagcggcgtaag
tacggtgtctcctgggctttcactgatttttccgacagtaaccagcgtcaggaagtctca
cttgagggtcaggaacgcatctggtcttcaccatatttgattgtcgatttcctacccaat
ctgtattacgaacaaaatacagaacacgacactccatactacaaccctataaaaacgttc
gatattgttccggcatttgaggcaagtcatttgttatggcgaagctatgaaaatagctgg
gagcaaatcttcagcgcaggtgttggtgcctcctggcaaaaacattatggcacggatgtc
gtcacccaactcggctacgggcaacgtattagctggaatgacgtgattgatgctggcgca
acgctacgctgggaaaaacgaccttatgacggtgacagagaacacaacttatacgttgaa
ttcgatatgacattcagattttaa
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