Escherichia coli UM146: UM146_15980
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Entry
UM146_15980 CDS
T02000
Name
(GenBank) pathogenesis-related protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
elu
Escherichia coli UM146
Pathway
elu03420
Nucleotide excision repair
elu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UM146_15980
03430 Mismatch repair
UM146_15980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elu03400
]
UM146_15980
Enzymes [BR:
elu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UM146_15980
DNA repair and recombination proteins [BR:
elu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UM146_15980
MMR (mismatch excision repair)
Other MMR factors
UM146_15980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
UvrD_C
AAA_30
Viral_helicase1
MCM_C
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADN72555
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Position
3315437..3317275
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AA seq
612 aa
AA seq
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MTIKQTEEILDSNIHNYLTGTQKHSFLLYAGAGSGKTRTLVNVLEMILKSHSEEFRLRGK
RIAVITYTNAACDEIKRRVKFNKLIDVSTIHSFLWELIRHHSSDIKSWLMENIAAEIADL
RDKQSRTTRVSQASLERERKIVSKEKRLQNLSDVYKFTYNPTGDNRTKDSLNHSEVIKLG
SYFLDRKYTMQKILVNRHPILLIDESQDTNKLLMNALLEVEKNNRDTFSVGLLGDMMQRI
YSDGKSDLEACLDEHWKKPEKSINYRSPKRVVALINLIRSQVDNHKQKAREDAEEGYVRI
FIKECHSDNKDRDESFVKKRMREITLDDDWENHDSLVNTLILEHHMAATRMGFIDMFTPL
YQIERLKTGLLEGSLGNINFICGIVSPLISACIKNDTFTITNILRTNAPLLKREHLLKNT
NNTSPLTQIRNSLDMLKSFISTNPELITINLLHKINEIKLLDVPDSIQEILESNDNSQDD
IIEAWQKAFSSPLCQFDKYYNYVKGKTNIDTHQGVKGLEFPRVLVLIDDSEAKGFMFSYD
KLFGVKEKTKTDLDNEKEGKDTSEDRTRRLFYVTCSRAQKSLAILAYTDNTEMLRKNLLH
KGWFDSSEIEII
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaaacaaactgaggaaatattagattctaatatacataattacttaacgggc
actcaaaagcatagtttccttctttatgctggagctggctctggtaaaaccaggacttta
gttaatgttctggaaatgatattgaagagtcactcagaagagttcaggctaagagggaaa
agaatagccgtgataacatacaccaatgcggcttgtgatgaaataaaaagaagagttaaa
ttcaacaaattaatagatgtgtctacaattcatagtttcctatgggagctaatcaggcat
cactccagtgatataaaatcttggttaatggaaaacattgctgcggagatagctgattta
agggacaaacaaagcagaacaactagagtttcacaagcttctttagaaagagaaagaaag
atagtttccaaagaaaaacgtctgcaaaacttatcagatgtatataaattcacatacaac
cctaccggggataataggactaaagactctctaaatcattcagaagtcattaaactcggt
tcttattttctagatagaaaatatactatgcagaaaatattggttaatcgccatccaatt
cttttaattgatgaaagccaagatactaacaaactgctaatgaatgcattactcgaagtt
gagaaaaataacagagatacattctcggtgggtctgttaggggacatgatgcaaaggata
tactctgatggtaaaagtgatttagaggcatgccttgacgaacactggaaaaaacctgaa
aaaagcattaactatcgttctccaaaaagagtggttgctttaattaatttaattagaagt
caagtggataatcataaacaaaaggccagagaagatgccgaggaaggatatgtaagaatt
tttataaaagaatgtcattctgataataaagatagagatgaatcgtttgtaaaaaaaaga
atgagagaaattactttagatgatgattgggaaaaccatgattcattagtaaacacccta
atattagaacatcatatggccgcaacacgtatgggctttatagacatgttcactcctctc
tatcaaattgagcgattaaaaactgggcttttagagggctctctgggtaatataaatttc
atttgtggaattgtttcaccattaatatccgcctgtattaaaaatgatacttttactatc
actaacattttacgaacaaatgcacccttattaaaaagagaacatcttttaaaaaacaca
aataatacctcgccacttacacagatcagaaactctcttgatatgttaaagagttttatt
tctacaaaccccgaacttatcacaattaatttactacataagataaatgaaataaaatta
cttgacgtcccagattctatacaagaaatcctagaaagtaacgataactcacaagatgat
atcattgaagcttggcagaaagcgtttagctctcctttatgtcaatttgataaatattat
aattatgtcaaaggcaagacaaacatcgatactcatcagggagttaaaggtctagaattt
cctcgtgttctagttttaattgatgattctgaggctaaaggttttatgtttagttatgac
aaacttttcggtgttaaagaaaaaaccaaaactgatttagataatgagaaagaaggtaaa
gatactagtgaagacagaactagaagactattttacgtcacatgtagtcgagcacaaaaa
agcctcgccattcttgcttatacagataatacagaaatgctaagaaaaaacctattacat
aaaggatggtttgattcgagtgaaatagaaataatttaa
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