Escherichia coli UM146: UM146_18330
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Entry
UM146_18330 CDS
T02000
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
elu
Escherichia coli UM146
Pathway
elu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UM146_18330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elu03400
]
UM146_18330
Enzymes [BR:
elu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
UM146_18330
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UM146_18330
DNA repair and recombination proteins [BR:
elu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UM146_18330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ADN73012
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All DBs
Position
complement(3810935..3811744)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL
LELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIVATKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgaaaccagccgtcgcggcatagaaccgcatctcgttggt
gcaaccattcttcatgcggtggtgcgcaacggacgcttgcgctggccggtttcagaagag
atctaccgtttaagcgaccaaccagtgcttagcgtgcagcgccgggctaaatatctgctg
ctggagctgcctgagggctggattatcattcatttggggatgtctggcagcctgcgcatc
cttccagaagaacttccccctgaaaagcatgaccatgtggatttggtgatgagcaacggc
aaagtgctgcgctacaccgatccgcgccgctttggtgcctggctatggaccaaagagctg
gaagggcacaacgtgctggcccatcttggaccggagccgcttagtgacgatttcaacggt
gagtacctgcatcagaagtgcgcgaagaaaaaaacggcgattaaaccgtggctgatggat
aacaagctggtggtaggcgtagggaatatctatgccagcgaatcgctgtttgcggcgggg
atccatccggatcggctggcgtcatcactgtcgctggcggagtgtgaattgttagctcgg
gtgattaaagcggtgttgctgcgttcgattgagcagggcggtacaacgctgaaagatttt
ctgcaaagtgatggtaaaccgggctatttcgctcaggaattgcaggtttacgggcgaaaa
ggtgagccgtgtcgggtgtgcggtacgccgattgtggcgactaaacatgcgcagcgggca
acgttttattgtcggcagtgccagaagtaa
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