Escherichia coli UM146: UM146_18725
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Entry
UM146_18725 CDS
T02000
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
elu
Escherichia coli UM146
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elu03016
]
UM146_18725 (trmE)
Transfer RNA biogenesis [BR:
elu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
UM146_18725 (trmE)
Prokaryotic type
Methyltransferases
UM146_18725 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADN73087
LinkDB
All DBs
Position
3890459..3891823
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AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGLKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNNVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcctcaaagcccgtgaagttgccgaaaccgtgctgggtaaactg
cctaagccacgctacgccgattatcttccgtttaaagacgccgatggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgctggaa
ctgcaaggtcatggcggtccggtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgcccgccctggtgagttttccgaacgcgcatttctgaacgataaa
ctcgacttagcccaggccgaggcgattgcggatcttatcgacgccagctcggaacaggcg
gcccgttcggcgctaaactcgctgcaaggcgcgttctccgcacgggtcaaccatctggtg
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttcccggatgaagag
atcgatttcctctccgacggcaaaattgaagcccagctcaataacgtaattgccgatctc
gacgcggtacgcgccgaagctcgtcagggtagtttgttgcgcgaagggatgaaagtggtg
attgccggacgtcctaacgccggtaaatcgagcctgctgaacgcgctggcgggccgtgaa
gcagcaatcgtaaccgatatcgccggaaccacgcgtgacgtgctgcgtgagcatatccac
attgacggaatgccgttgcatatcatcgataccgccgggctacgtgaagccagtgacgaa
gttgaacgtattggtatcgagcgcgcatggcaggaaattgaacaggcagaccgcgtgctg
tttatggtcgatggcaccacgacagacgccgttgatccggcagagatctggccggaattc
atcgcccgtctgccagcgaaactgccgatcaccgtggtgcgcaataaagccgatatcacc
ggcgaaacgttggggatgagcgaagtgaacggtcatgcgttaattcgtctttcggcgcgg
actggcgaaggcgtggatgtactgcgtaaccatctcaaacagagcatgggctttgacacc
aatatggaaggcggcttcctggcgcgtcgtcgtcacctacaggcgctggaacaggcggca
gagcatttgcagcaaggtaaagcgcaactgttaggtgcctgggcgggtgaactgctggcg
gaagagttgcgcctggcgcagcagaacttaagcgagatcaccggggaatttacttcagac
gacctactggggcggattttctccagcttctgtatcggtaagtaa
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