Escherichia coli UM146: UM146_23540
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Entry
UM146_23540 CDS
T02000
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
elu
Escherichia coli UM146
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elu03016
]
UM146_23540
Enzymes [BR:
elu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
UM146_23540
Transfer RNA biogenesis [BR:
elu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
UM146_23540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADN74027
LinkDB
All DBs
Position
complement(4928296..4928826)
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AA seq
176 aa
AA seq
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MSEPQRLFFAIDLPAEIREQIIRWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL
SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR
PFHPHITLLRDASEAVTIPPPGFNWSYTVTEFTLYASSFARGRTRYTPLKRWALTQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgcaacggctgttctttgctatcgacttacctgcagaaatccgcgaacag
attatccgctggcgcgccacacacttcccacctgaggcgggacgtccggtcgccgccgat
aatttgcatctgactctggcatttttaggcgaagtgagcgcagagaaagagaaggcgctt
tctcttttagccggacggattcgtcaacctggtttcacactcacgcttgatgacgccggt
caatggctgcgttcgcgtgtggtgtggttagggatgcgacagccgccacgcggcttaatc
cagctggcgaatatgctccgttcacaggctgcccgcagcggttgttttcaaagcaatcgt
ccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgacaatcccgccg
ccaggttttaactggtcgtatacggtgacggagttcaccctttacgcctcctcgtttgcc
cgtggacgcacacgctacacgccgctaaaacgctgggcgctaacgcaataa
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