Escherichia coli UM146: UM146_24061
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Entry
UM146_24061 CDS
T02000
Name
(GenBank) conjugal transfer nickase/helicase TraI
Organism
elu
Escherichia coli UM146
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
TraI_C
AAA_30
TraI_2B
TraI_hel_assoc_N
ssDNA_TraI_N
AAA_19
HPTransfase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADN74088
LinkDB
All DBs
Position
pUM146:complement(3887..9157)
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AA seq
1756 aa
AA seq
DB search
MLSFSVVKSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKDVFTRLLEGRL
PDGADLSRMQDGSNKHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL
ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQDPQLHTHVVVANVTQHNGEWKTLSSDKV
GKTGFSENVLANRIAFGKIYQSELRQRVEALGYETEVVGKHGMWEMPGVPVEAFSSRSQA
IREAVGEDASLKSRDVAALDTRKSKQHVDPEIRMAEWMQTLKETGFDIRAYRDAADQRAE
IRTQAPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG
IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS
DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNLKQDE
RLSGELITGRRQLQEGMVFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR
TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYDRLAGDFAASVKAGEESVAQ
VSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN
PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV
TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAXLPVSDSPFTALKLENGWVETPGH
SVSDSAXVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI
KARAGETSLETAISLQKTGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTG
FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMER
VPGELMETLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPASERPRV
VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM
ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVXIMKEIVRQTPELREAV
YXLINRDVERALSGLESVKPSQVPRXEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGET
FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGQEQVM
VPVLNTANIRDGELRRLSTWENNPDALALVDSVYHRIAGISKDDGLITLEDAEGNTRLIS
PREAVAEGVTLYTPDKIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT
RVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK
QHVQVYTDNRQGWTDAINNAVQKGTAHDVLEPKPDREVMNAQRLFSTARELRDVAAGRAV
LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE
GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT
GGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP
DGKTELAVRDIAGQERDRSAISERETALPESVLRESQREREAVREVARENLLQERLQQME
RDMVRDLQKEKTLGGD
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtttcagcgttgttaaatcggcaggcagtgccggaaactattacaccgacaag
gataattactatgtgctgggcagcatgggagaacgctgggctggtcagggggctgaacag
cttgggctgcagggcagcgtcgataaggatgtttttacccgtcttctggagggcaggctg
ccggacggggcggatttaagccgcatgcaggatggcagtaataagcatcgtcccggctac
gacctgaccttctccgcccccaaaagtgtctccatgatggccatgctcgggggggataaa
cgtcttattgatgcacataaccaggccgtggattttgctgtccgtcaggtggaggcgctg
gcttccacacgggtgatgacggacggacagtcagaaacggtgctgaccggtaatctggtg
atggcactgtttaaccatgacaccagtcgcgatcaggacccacagttacacacgcatgta
gtggtggctaatgtcacgcagcataacggcgagtggaagacactgagcagtgacaaagtg
gggaaaaccggattttccgagaacgtgctagcgaaccggattgcgttcgggaaaatatat
cagagtgagttacgtcagcgcgttgaggcgctgggttatgaaaccgaagtggtcggtaag
cacggtatgtgggagatgccgggcgtaccggtggaggccttttccagtcgttcacaggct
atcagggaggccgtcggtgaagacgcctcgctgaaatcccgggatgtggcggcactggat
acgcgaaaatccaaacagcacgtcgatccggaaatcagaatggctgaatggatgcagacg
ctgaaggaaaccgggttcgacatccgggcatatcgtgacgcggcggatcagcgtgcggag
atccgcacgcaggcgcccgggcctgcttcacaggacgggccggatgtgcagcaggcggtg
acacaggcgattgccggattaagtgaacgaaaagtgcagttcacgtatacggacgtgctg
gccaggacggtcggcatactgccgccggaaaatggtgtgattgaacgggcacgcgccggt
atcgatgaggccatcagccgtgagcagcttatccccctcgaccgtgagaaggggctgttc
acatcaggaattcatgtgctcgatgagctgtccgtccgggcactcagtcgygayatcatg
aaacagaaccgggtgaccgtacatccggagaaaagtgtcccccggacggcyggttacagc
gatgcsgtcagtgttctggcacaggaycgtccgtcgctggccattgtgtccgggcagggc
ggtgcagccgggcagcgtgagcgggtggctgaactggtcatgatggcccgggagcagggg
cgggaggtgcagattatcgcygctgaccgtcgctcgcagatgaacctgaagcaggatgaa
cggctgtccggtgagctgataaccggacgtcgtcagctgcaggarggcatggtcttcacg
ccgggcagtactgttatcgtcgaccagggcgaaaaactctccctgaaagagacgttaacc
ctgctggacggtgccgcacgtcataacgtacaggtcctgataaccgacagcgggcagcga
accggtacaggcagtgcgctgatggccatgaaggatgccggggtgaacacgtatcgctgg
cagggcggagaacagcgaccggcaaccatcatcagtgaaccggaccggaatgtccgctat
gaccggctggccggagattttgcggccagcgtgaaagccggagaagagagcgtggcacag
gtcagcggggtacgggaacaggccatactgacacaggccattcgcagtgagctgaaaaca
cagggcgtgctcggacacccggaggtgaccatgaccgccctgtcaccggtctggctggac
agccggagccgttatctgcgggatatgtaccgaccggggatggtgatggagcagtggaac
ccggagacacgcagtcatgaccgctatgttatcgaccgggtgacggcgcagagtcacagc
ctgaccctgcgggatgcgcagggcgaaacgcaggtggtgcgtatttcctccctggacagc
agctggtcgctgttccggccggaaaaaatgccggtggcagacggcgagcgactgagggtg
acagggaaaattcccggactccgcgtctccggcggtgaccgcctgcaggtggcatccgtc
agtgaagatgcgatgacggttgttgtgccggggcgggctgaaccggccwccctgcctgtg
agcgattcaccrttcacggcactgaagctggagaacggctgggtggaaacgcccgggcat
tccgtcagygacagtgcgamggtktttgcctccgtcacacagatggcratggayaacgcs
accctgaacggtctggcccgcagcggtcgtgatgtccggctgtattcctcactggatgaa
acccgtactgcggaaaaacttgcccgccatccctcctttacggtggtttctgagcagata
aaggcgcgggccggtgagacatcgctggaaaccgctatcagtctgcagaaaaccgggctg
cacacgccggcacagcaggccattcatctggcccttcctgtgctggaaagtaaaaacctg
gccttcagcatggtggacctgctgacagaggcgaagtcgtttgctgcagaaggaaccggt
tttactgaactgggaggggaaatcaatgcgcagataaaacgcggtgacttactgtatgtg
gatgtggcaaaaggctatggcacaggcctgctggtttcycgtgcgtcgtatgaggcagaa
aaaagtattcttcgccatattctcgaaggtaaggaggcggtcacgccgctgatggagaga
gtacccggcgaactcatggagacgttaacgtcgggacagcgtgccgccacccgtatgata
ctggaaacgtccgaccgtttcacggtggtacagggttatgccggtgtgggtaagaccaca
cagttccgggcggtgatgtcagccgtgaacatgctgccggcgagtgagcgtccccgagtt
gtggggctggggcccacgcaccgtgcggtcggtgagatgcgcagcgccggcgtggatgca
cagacgctggcgtcctttctgcatgacacgcagctgcagcagcgcagcggagaaacgccg
gatttcagcaacacgctgttcctgctcgatgagagctcaatggtgggcaataccgacatg
gcacgggcatacgccctgattgcggccggtggcggtcgtgccgtggccagtggtgacacg
gaccagctgcaggccatcgcgcccggtcagcctttccgtctccagcagacgcgcagtgct
gccgatgtggycatcatgaaggagattgtgcgtcagacgccggaactgcgggaggcggta
tacarcctgattaaccgggatgtggaaagggcactrtccgggcttgagagtgtgaaaccg
tctcaggtkccmcgtcwggagggcgcatgggcaccggagcactccgtgacggagttcagt
cacagccaggaagcgaaactggcagaagcgcagcagaaggcgatgctgaaaggtgagact
tttccggatgtccccatgacactgtatgaagccattgtccgcgactataccggcaggaca
ccggaagcacgggagcagacgctgattgtcacgcacctgaatgaggaccggcgcgtactg
aacagcatgattcatgatgcacgggaaaaggccggtgagctggggcaggagcaggtcatg
gtgcctgtcctgaacacagcgaatatacgygacggggagctgcgtcgtctctccacctgg
gagaataacccggatgcccttgccctggtggatagtgtgtatcaccggattgccggtatc
agcaaggatgacgggctgataaccctggaggatgcggaaggtaacacgcggctgatttcg
ccccgggaggcggtggctgaaggtgtcacactgtacaccccggacaaaatccgggtgggg
accggcgaccggatgcgcttcacgaagagtgaccgggagcgcggttatgtggccaacagc
gtctggacggtgacagcggtttccggtgacagtgtcacgctgtcagacggacagcagacc
cgggtgattcgccccggccaggagcgggcagagcaacatattgacctggcttatgccatc
accgcccacggtgcgcagggggcgagtgaaacctttgccatcgcgcttgaaggcacggaa
ggtaaccggaaactgatggccggctttgagtcagcctacgtggccctgtcgcgtatgaag
cagcatgtgcaggtgtacaccgataaccgtcagggctggacggatgccattaacaatgcc
gtacagaaaggaactgcccacgatgtgctggagccgaaaccggaccgggaggtcatgaat
gcgcagcggctgttcagtacggcacgggaactgcgggacgtggcggcaggccgtgccgtt
ctccgtcaggcagggctggccgggggagacagccctgcacggtttattgcaccgggacgt
aaatatccgcagccgtatgtggcactgccggcgtttgaccgtaacggcaagtcagctggt
atctggctgaacccactgaccacggatgacggaaacgggctgcggggattcagtggtgaa
ggacgggtgaaaggcagcggggatgcgcagttcgtggccctgcagggcagccgtaacgga
gagagcctgctggctgataatatgcaggatggcgtccggattgcccgtgataatcctgac
agcggtgtggtggtgagaattgccggtgaaggtcgtccgtggaatcccggtgccatcacc
ggtggccgcgtgtggggggatatcccggataacagcgtccagccgggggccggaaatggc
gaaccggtcacggcagaggtactggcacagcggcaggctgaagaggccatccgccgtgaa
acggaacgccgcgcagatgaaattgtcaggaaaatggcagagaacaaacctgacctgccg
gatggcaaaacagagctggctgtcagggatattgccggacaggagcgtgaccggtctgcc
atatctgaacgggaaaccgcactgccggagagtgtgctgcgtgaatcacaacgggagcgg
gaagcggtccgggaggttgcccgggaaaatctgctgcaggagcgtctgcagcagatggag
cgggatatggttcgtgacctgcagaaagagaaaaccctgggcggagactga
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