Ereboglobus luteus: CKA38_11425
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Entry
CKA38_11425 CDS
T09773
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
elut
Ereboglobus luteus
Pathway
elut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKA38_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elut03019
]
CKA38_11425
03009 Ribosome biogenesis [BR:
elut03009
]
CKA38_11425
Enzymes [BR:
elut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CKA38_11425
Messenger RNA biogenesis [BR:
elut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CKA38_11425
Ribosome biogenesis [BR:
elut03009
]
Prokaryotic type
rRNA helicases
CKA38_11425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AWI09779
UniProt:
A0A2U8E4D5
LinkDB
All DBs
Position
complement(3137748..3139475)
Genome browser
AA seq
575 aa
AA seq
DB search
MSNLRFSELGLSAEILKAVDKMGFEEASPIQTAAIPPIMAGEDIVGLSSTGSGKTAAFAI
PMVEKIDPKMRKVQILVLCPTRELAVQVAEEVAKISLFKRGVHAVPIFGGQSYDRQFRAL
ESGVQIVIGTPGRVIDHIERGTLRLDELKMLVLDEADRMLDMGFREDIERVLTQVPTEHQ
TLFFSATMPRQIEELIRKYSRNPKRIKIEAVAQNAPQVDQVYFEVERRSKIEVLTRIIDI
NDFRYGIVFCSTKVMVDELDEHLHARGYATERLHGDISQAQRTRVMDKFRRRGFEFLIAT
DVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRAGKSGKAFTFVSGRELYSLQNMIR
YGKLKIRREKIPSLDLVEEARENQFFEKLRSTLDAAEYRKQDRLIDRLLEQGYASTDIIA
AVIHMTIGGEGDKKTAPPAQIDLPPEKADWKKKPFADKPKKQGKPDNAGRQNKSAFKTAK
QKYDRPARTGREAGFVTLFFNVGRKQLVTPADIVGKVAGVTRLPADVVGAIDIHQRHTFA
DVREEHAELIIEKVNGIRIRGESACVALADPEQME
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctccgtttttccgaactcggcttgtccgccgaaatattgaaggccgttgac
aagatgggtttcgaggaggcgtcgccaatccagaccgccgcgattccgccgatcatggcg
ggcgaggatattgtcgggctttcgtcaaccggctcgggaaaaacggcggcgttcgcaatt
ccgatggtcgagaagatcgatccgaaaatgcgcaaggtgcaaatcctcgtgctttgcccg
acgcgcgagctggcggtgcaagtggcggaggaggttgcgaaaatctcgcttttcaaacgc
ggcgtgcacgcggtgccgattttcggcggacaatcgtatgaccggcaatttcgcgcgctg
gaaagcggcgtgcaaatcgtgatcggcacgccggggcgcgtgatcgaccacatcgagcgc
ggcacgctgcggctcgacgagctcaagatgctcgtgctcgacgaggccgaccgaatgctc
gacatggggttccgcgaggacatcgagcgcgtgctcacgcaggtgccgacggagcaccaa
acgttgtttttctcggcgacgatgccccggcaaatcgaggagttgatccgcaaatacagc
cgcaatccgaagcgcatcaaaatcgaggcggtcgcgcaaaacgcgccccaggttgaccag
gtttatttcgaggtggagcggcgctcgaagatcgaggtgctcacgcgcatcatcgacata
aacgatttccgctacggcattgttttttgcagcacgaaagtgatggttgacgagctcgac
gagcacttgcacgcgcgcggctacgcgaccgagcggctgcacggcgacatttcgcaggcg
cagcgcacgcgcgtgatggacaagtttcgccggcgcggatttgagttcctgatcgcgacc
gatgtggcggcgcgcgggctcgacgtggacgacctcgaggtcgtgtttaacttcgacctg
ccgaacgacgccgaggattacacgcaccgcatcgggcgcacgggccgcgcgggcaagtcg
ggcaaggcattcacgtttgtttcgggacgcgagctctactcgctgcaaaacatgattcgt
tacggaaagttgaaaattcgccgcgaaaaaataccgtcgctcgacctcgtggaggaagcg
cgtgaaaaccagtttttcgaaaagctacgcagcaccctcgacgccgcggaatatcgcaag
caggatcgcctgatcgaccgcctgctcgagcagggttatgcgagcacggacatcatcgcg
gcggtgattcacatgacgattggcggcgagggtgataagaaaaccgcgcccccggcgcag
attgatctgccgccggaaaaggccgactggaaaaagaaaccttttgcggacaagccgaag
aaacagggcaagccagacaacgcgggcagacagaacaagtcggcgttcaagactgctaaa
cagaaatacgaccgtccggcgcgcacgggacgcgaggcgggcttcgtaactttgtttttc
aacgtgggacgcaagcagcttgtcacgccggcggacattgtgggcaaggtcgccggggtc
acacggctgccggcggatgtagtgggcgcaatcgacattcatcagcggcacacgtttgcc
gacgtgcgcgaggaacacgcggaattgatcattgaaaaggtgaacggcatccgcatccgc
ggtgaatcagcttgcgtggcacttgccgacccggagcaaatggagtga
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