Candidatus Walczuchella monophlebidarum: FNIIJ_109
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Entry
FNIIJ_109 CDS
T03207
Symbol
dnaE_dnaQ
Name
(GenBank) putative DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
elv
Candidatus Walczuchella monophlebidarum
Pathway
elv03030
DNA replication
elv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNIIJ_109 (dnaE_dnaQ)
03430 Mismatch repair
FNIIJ_109 (dnaE_dnaQ)
03440 Homologous recombination
FNIIJ_109 (dnaE_dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elv03032
]
FNIIJ_109 (dnaE_dnaQ)
03400 DNA repair and recombination proteins [BR:
elv03400
]
FNIIJ_109 (dnaE_dnaQ)
Enzymes [BR:
elv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNIIJ_109 (dnaE_dnaQ)
DNA replication proteins [BR:
elv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNIIJ_109 (dnaE_dnaQ)
DNA repair and recombination proteins [BR:
elv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNIIJ_109 (dnaE_dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
GLUCM-like_C
P63C
Rad10
Motif
Other DBs
NCBI-ProteinID:
AID37404
UniProt:
A0A068DSN9
LinkDB
All DBs
Position
99690..103943
Genome browser
AA seq
1417 aa
AA seq
DB search
MYLIFDTETNGLPENYDTEKSPRMVQLAWQLYDETFERIEVKNFIVKSEGFDIPFNSVKI
HGITAERSLREGYPLQDVLICFKKALEKSQFLIGHNIAFDINVVSCEFFRKNYPNLFLQK
TVLDTKDESINYCAFKGRGRGKKFKWPTLTELYYKLFGTNFPQAHNAAADVEATVHCFVE
LLRLGVISVDKLGIDQFRVKKFIQKVKSLKISPIGQNVCTEFRQRKVHPVEKPAQINNLR
AKFAQIHNHTTFSILSATTDVSSLVKRAFQWGMPAVGITDYGNLMGSFSFLKEIEKANAQ
IDQKSKTLKGIIGCEIFMSENDIKKKITKDHPDIRYKQVFLAKNKNGYQNLSKLCSEGYI
NGQYAPRVGKELILQYKEGLITFTGYLDSEIPSTILNQGEIQGEEIFKWWHNTFKDDFYV
ELFRHGLEEEDYVNEVLLRFSEKYNVKYIPQNNSFYLDREDANAHDILLCVRDREKKSTP
IGSGRGYRFGFRNQEFYFKSASQMIENFSDFPKSFDYLEELINKISHYSLEREVILPHFE
ITKVAYEGQRGENAYLSYLAYQGAEKRYGKLSKRLRERLEFELNTIERTRYPGYFLIVQD
IVAQAKKMGISVGPGRGSGAGSLVAYCIGLTQIDPIRYNLLFERFLNPDRISMPDIDIDF
DDRGRDRIIAWIVKKYGRKQVAKIITYSRMGAKSAIRDSARVLDLPLAEADRLAKMMPNL
SLKELFSSTQIQEKIHVFDLENALKIKQISQEQNLEGKVLRQASVIEGSLRNIGVHACGI
IITPSDITNYIPVAISKDSDLLITQFDNNWVENAGLLKIDILGLKTLTIIKDSIKLIETR
HGLILNPNQFPLDDPKTSKLFQRGDTVAVFQYESYGMKSYIRKLNPDNFDDLIAINALYR
PGPLQYIPNFIARKHGKESITYSFPEMEEFLSSTYGITIYQEQVMLLAQKLAGFGKGEAD
VLRKAMGKKQKPVLDQMKSKFIEGAVQKGYTKKILEKIWTDWESFASYAFNKSHSTCYAN
LAFQTAYLKAHYPSEYMAAVLSNNMHNLKEIIFLMEECRRLGVLVLCPDINESYYTFSVN
EKGAIRFGMGAIKGIREASIEAILQEREKKGIYRSIFDLVKRVDFRIVNKKTLESLVLSG
AFDSFSNVHRAQYFDKKKNCFTALEKIIRFGEKYQNSKQKNQCSLFQEEPVLPYCTPWPN
LIKLLKEKEVIGIYISSHPLYDYRQEILAIEGIPLQEFNRNEYKWRGKEVNLYGIILRFE
KKISVKNNSRYGVFTLEDYQGTREFRIFGAYYTKYAYLLVPNTLIHLKIILSNFKILSNF
QKFRVSFLNIQLLDNVLNSTDKDLYLKIDLERLDNEMINNIEQTISKYKGSRKLKVILLY
HQGKRYMGMLSRSYGVSIERGLVSDLEQIPNISLNLS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgatttttgatactgaaaccaatggtttaccggaaaattatgataccgagaag
tcgccgcgtatggttcaactcgcttggcaattgtatgatgagacctttgaaaggattgag
gtaaaaaactttattgtcaaatctgaaggatttgatattccttttaattcggttaaaatt
catggtattactgctgaaagatctctaagagaaggatatcctttacaggatgttcttatt
tgttttaaaaaagctctggagaaaagtcaatttctaattggtcataatattgcttttgat
atcaacgttgtcagttgcgaattctttagaaagaattatccgaatttgtttttgcaaaaa
actgttttagatactaaagatgaatctataaattattgtgcttttaagggaagaggaaga
ggtaaaaaatttaaatggcccactctgactgaactatattataaactttttggtaccaat
tttccgcaagcgcataatgctgcagctgatgttgaggctacagtgcattgctttgttgaa
ttattacgtttaggtgtcatctcagttgataaattagggatcgatcaatttagagtaaaa
aaattcatacaaaaagttaaatctctgaagataagtcctatcggtcaaaacgtctgtaca
gaattccgtcaacggaaagttcatcctgtagaaaaacctgcacagataaataatttgcga
gccaaatttgcgcagatccacaatcatacgactttttcgattttatcagctactacagac
gtatcatctctggtcaaacgtgcatttcaatggggaatgcctgcggtaggaattactgat
tacggtaatcttatgggatctttttcctttttgaaagaaatagagaaagccaatgctcaa
attgatcaaaaatcgaagacccttaagggaattataggttgtgaaatttttatgtcagaa
aatgatattaaaaaaaaaattactaaagatcatcctgatatacgttacaaacaagttttt
ttagcaaagaataaaaatggttatcagaacctatctaaactttgttctgaaggttacata
aatggacaatatgcaccccgagtaggtaaagaactgattctgcaatataaggaaggtcta
ataacttttacaggatatcttgattctgaaattccatccacaatccttaatcagggagaa
atccagggagaagaaatttttaaatggtggcataacacttttaaagatgatttttatgta
gaacttttccgtcacggattagaggaagaagattatgttaacgaagtattacttagattt
tcagaaaaatataatgtaaaatatataccccaaaataatagcttttatttagatagggaa
gatgctaatgctcatgatattctgctttgtgtccgagatagagaaaaaaagtctacccca
ataggctcagggagaggatatcgttttggatttaggaaccaggagttctattttaaaagt
gcttctcagatgattgagaatttttcagatttccctaaatcctttgattatttagaggag
ttaataaataaaatcagtcattattctctagaaagagaagttatattacctcattttgaa
attactaaagttgcatatgaggggcaacgtggagaaaatgcctatctgagttatttagct
tatcaaggggcagaaaaacgttatggaaaactcagtaaaagattgcgagaacgcttggaa
tttgaattgaataccatagagagaacaagataccctggttattttcttattgttcaagat
attgtggcacaggctaaaaaaatgggaatatctgttggtccagggagaggatcgggagct
gggtctttggtagcttactgtataggtcttacacagatagatcctatccgatacaatctc
ctttttgagcgttttttaaatcctgatagaatatctatgccagatatagatatagatttt
gatgaccgtggtcgtgacagaataatagcatggatagtaaaaaaatatgggcgaaaacaa
gttgctaaaattattacctatagtaggatgggagctaaatctgctatacgagattccgcc
cgtgttcttgatcttccattagcagaggcagatcgtttagctaaaatgatgcctaatctt
tcgttgaaagaacttttttcgtccacacagatccaagaaaaaattcatgtatttgacctc
gaaaacgcattaaaaattaaacaaatttcccaagaacagaatcttgaaggaaaagtttta
cgacaagcaagtgttattgaaggatctctgagaaatatcggagtccatgcttgcggaatt
atcatcaccccatccgacattactaattatatcccagtagctatttccaaggattcagat
ttgcttattacacaatttgataataattgggtcgaaaatgctggactcctaaaaatagat
attttaggtctcaaaacactaactattattaaagatagcatcaaattaatcgaaacccgt
catggattaatcctcaatcctaatcaattccctttagatgatcccaaaacttctaaactt
ttccaacgaggagataccgtagcagtattccagtacgagtcatatgggatgaaaagttat
atacgtaaactcaaccctgacaatttcgatgacctcattgcaattaatgcactttatcga
ccaggtccattacaatatataccaaattttattgcccggaaacatgggaaggaatctata
acatatagtttccctgaaatggaagaattccttagcagtacttatgggattactatttat
caagaacaagtaatgttgttggctcaaaagcttgcaggatttggtaagggagaggctgat
gtcttacgtaaggctatgggaaaaaagcaaaaacccgtacttgatcaaatgaaaagtaag
tttatagaaggagctgtccagaaaggatatacaaaaaaaatcttagaaaaaatttggact
gattgggaatcctttgcttcctatgcttttaataaatcacattctacttgttatgcgaat
cttgcttttcaaaccgcttatctaaaagctcattacccgtctgaatatatggcagcagta
ttgagtaataatatgcacaacctcaaggaaattattttcctgatggaagaatgtcgtcgt
ctaggagtattagtactttgtcccgatattaatgaaagctattatactttttcggtcaat
gaaaaaggagctatacgttttggcatgggagctataaaaggtataagggaagcttcgata
gaagctattctacaggaacgtgaaaaaaaagggatttatcgttccatttttgatttagta
aagagagttgatttccggatagtgaataaaaagactttagagtctttagtactttcagga
gcttttgatagctttagcaatgttcatcgtgcacaatattttgacaaaaaaaaaaattgt
ttcactgctcttgaaaaaattatccgttttggagaaaaatatcagaatagcaaacaaaaa
aaccagtgttctctttttcaagaggaacccgtattaccatattgtactccctggccaaat
cttattaaactcctgaaggaaaaagaagtcattgggatctacattagttctcatccatta
tatgattatcgtcaggaaattctagctatagaaggtattcctcttcaagaattcaataga
aatgaatataaatggagaggtaaagaagtaaatctctatggaatcattcttcggttcgaa
aaaaaaatatctgtaaaaaacaatagtcgatatggagtatttactctagaagattatcaa
ggaacgcgggagttcagaatatttggcgcatattatacaaagtatgcttatttacttgtg
ccaaatactttgatccatcttaagataatacttagtaactttaaaatacttagtaacttt
caaaagttccgtgtcagcttcttgaacattcaactgcttgacaatgtattgaattcgaca
gataaagatctttatttgaagatcgatttagaaaggttagataatgaaatgattaataat
attgaacagacgatttcaaagtataagggttctagaaaattaaaggtcatcctgttatat
catcaaggtaaaagatatatgggtatgttatctaggagttatggagttagtatagaacgt
ggattagtatcagatttagaacaaattcccaacatttccttaaatctttcttaa
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