Candidatus Walczuchella monophlebidarum: FNIIJ_155
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Entry
FNIIJ_155 CDS
T03207
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
elv
Candidatus Walczuchella monophlebidarum
Pathway
elv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
elv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FNIIJ_155 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elv03021
]
FNIIJ_155 (rpoB)
03400 DNA repair and recombination proteins [BR:
elv03400
]
FNIIJ_155 (rpoB)
Enzymes [BR:
elv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FNIIJ_155 (rpoB)
Transcription machinery [BR:
elv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FNIIJ_155 (rpoB)
DNA repair and recombination proteins [BR:
elv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FNIIJ_155 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AID37438
UniProt:
A0A068DWP3
LinkDB
All DBs
Position
complement(161190..164963)
Genome browser
AA seq
1257 aa
AA seq
DB search
MSFASVKKQVEYPDFLEIQIQSFKEFFQLETQYEKKKNDGLFQTFRENFPIYDVRNQFVL
EFLDYFLDPPRYSISECLERGLTFSVSLKARMKISCQDPEHEDFKTVIQDVYLGTIPYMT
PTGSFIINGAERVVVSQLHRSPGICFGQSIHANGTRLYSARVIPVKGSVIEFSTDINNVM
YAYVDSKKKFPVTTLFRAIGYEQDQDLFYLFNFSEEVQVTQSNYNKLIGAKVGARVLKQW
IEDFVDEDTGEVISIKRNEVILDRDIILEHEHIYHLIESGIDSVILQKKEKNTIDYIILQ
NTLNTDPTNSGKEALEHIYRQFRNSSPPDEETAIGVIEKIFFNRCHLGEVGRYRLNQRLG
INIPIEIQVITKEDLIYIVKYILKRVHSKIDDMDNLSNRRVITVSEQLSAQLNIGLSRMA
RTIRDRMNVRDNEVFTPIDLINAKTLSSVINSFFCTSPLSQFMDQTNLLSEITHKRRLSS
LGPGGLSRDRAGFEVRDVHYTHYGRLCPIETPEGTNIGLIYSLCVFAKVNRLGFIETPYR
KVTNGQIDFSSSIYLPSEEESEKTIATAKAKVDEDGYFLTEIVISRKDGDFPLVEYEKID
YIDVGTNQIASLSASLIPFLEHDDANRALMGSNMMRQAVPLLCPESPIVGTGLEKKVATD
SRLLINAEGEGLVEDVESDHISIRYNITEEEAFLSFDSNIKTYNMMKFKKTNQNTSIRLK
PIVRKGMKVSKGQVLCEGYATEKGEIALGSNILVAFMPWKGFNFEDAFVLSERVVREDLF
TSIHIDEYSLEVRDTKLGMEELTSDIPNLSEEATKNLDENGIIRVGSEVKPGDILIGKIT
PKGEYDPTPEEKLLIAIFGERAGNVKDASLKADTSLYGVVIDRKLFSRSIKDKKIRALDK
MDIEYFESQYKSRFSELHKLLCEKLYILLQSKISRRIENDMQEEIIPAGNIFTKNLLENI
SDYINISSSEWTSDENTNRLVSMLLHNYKIKVRNFQGELNRHKLTLSVGDELPLGIVKLV
KVYIAKKRKLQVGDKMAVRHGNKGIVSRIVRDEDLPFLEDGTPVDIVLNPLGVPSRMNMG
QIYETILGWAGHKLGIKFSTPIFDGASIEQITEYTSKAGLPHLGSTYLYDGETGERFDKP
TTVGIIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALESFGAS
NILREILTVKSDDVVGRSKTYESIVKGETLPEPGIPESFNVLLHELKGLGLNLHLEE
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgagttttgcttctgtgaagaagcaagtagagtatccggattttcttgaaattcagatc
caatcttttaaggaattctttcaactagaaacccaatacgaaaagaaaaaaaatgacgga
ttatttcaaaccttcagggaaaattttcctatttacgatgtaagaaatcaatttgttcta
gaatttctagattatttcttagatcctccaaggtattcgatctcagaatgtcttgaaaga
gggttaacttttagtgtaagcttgaaggcaaggatgaagatctcttgtcaagatcctgaa
catgaagattttaagacagttattcaggacgtttatcttggaactattccctatatgact
ccaacagggtctttcataatcaatggagctgaacgtgtagtggtttcacaactgcatcgt
tctccaggaatctgttttggtcaatctatacacgctaatgggacacgtttatactcagct
agagtaatacccgtaaagggatcagtgattgaattttctaccgatataaacaatgtaatg
tatgcttatgtcgatagtaaaaaaaagtttccagttactacgctttttcgtgctattgga
tacgaacaagatcaagatcttttttatcttttcaacttctctgaagaagttcaggtcact
caatctaattacaacaaattaataggggctaaagttggagcacgtgttttaaaacaatgg
atagaagatttcgttgatgaagacaccggagaagttatttccattaaaagaaatgaggtt
attcttgatcgtgatattatccttgaacatgagcatatttatcacctcatagaatcaggt
attgatagcgtgattttacaaaaaaaagaaaagaacactatcgattatatcattcttcaa
aatacgcttaacacagatccgaccaattctggtaaggaagcgcttgaacatatatacaga
caattccgaaattcttcccctccagacgaagaaacagctataggagtaattgaaaaaatt
ttctttaatcgatgccatctcggagaagtaggaagataccgactaaatcaacgtttagga
ataaatattcctattgaaatacaggtaattacaaaagaagatttgatctatattgtcaaa
tatattctgaagagagttcactcaaaaatagatgacatggataatctttcaaatcgtaga
gtgataacagtaagtgagcaattatcggcacaattaaatattgggttatcacgtatggca
cgtactattcgtgatagaatgaatgtccgtgataatgaagtttttactcctatagattta
atcaatgcaaaaactctttcttctgtcatcaattcgtttttttgtactagcccactttct
caatttatggaccagactaatttactttctgaaatcacgcataagagaagactctcttct
cttggaccaggaggcctttcgagggaccgtgctgggttcgaagttcgtgatgttcattat
acccattacggtagactttgtcccatagaaaccccagaagggaccaatattggattaatt
tattcactttgtgtgtttgctaaagtgaatcgtctgggattcatagaaaccccttacaga
aaagtaacaaatggtcaaattgacttttcttcttctatttatctgccctctgaagaagag
tctgaaaaaactatagctacggctaaagcaaaggtggatgaagatggatattttctaacc
gaaatagttatttctcggaaagacggagattttcctctggttgaatatgagaaaattgat
tacattgacgtcggaaccaatcaaatagcttctctttcagcttctctaattccttttctt
gaacatgatgatgccaatcgtgctctaatgggttcaaatatgatgcgtcaagctgtgcct
ttgctttgtcctgaatctccgattgtaggaactggtctagagaaaaaagtggctactgat
tcccgtctacttattaatgcggagggagaaggtcttgtagaagacgtagaatcagatcat
atttctatacgttataacataactgaagaagaagcttttctaagttttgattctaacatt
aaaacttacaatatgatgaagtttaaaaaaactaatcaaaatacttcaattagacttaag
cctattgttagaaagggaatgaaagtatccaaaggacaagtgctctgcgaaggttatgct
acggaaaaaggagaaatagctttaggtagtaatatacttgtggcttttatgccttggaag
ggttttaattttgaagacgcttttgttctttcggagcgtgtagttcgtgaagatttattt
acatctattcacatagatgaatattctctcgaagtccgtgatacaaaattaggtatggaa
gaacttaccagtgatattcctaacctgagtgaggaggctactaaaaaccttgatgaaaat
gggattattcgtgtaggatcagaggtaaaacctggggatattcttataggaaagataact
ccaaaaggagaatatgatccgaccccggaagaaaaacttctcatagcgatatttggagaa
agagctgggaatgtaaaagatgcgtcattaaaagcagatacttcgctttacggagtggtt
attgatagaaagcttttttcaagaagtattaaagataaaaaaatccgtgccctagataaa
atggacatagaatattttgaatctcaatataaaagtcgtttttcggaattgcataagctg
ctatgtgagaaattatatatacttttacaatctaaaatctctcggagaatcgagaatgat
atgcaagaagaaattattcctgcaggaaacatctttactaaaaatcttctagagaatatt
tctgattatatcaatatttcttcttctgaatggacttcagatgaaaatacgaatcgttta
gtatcaatgctattacataattataaaattaaggttagaaatttccaaggagaactcaac
cgtcacaaattgactctttctgtaggtgatgaattgcccctgggaatagtcaaactagta
aaagtatacattgctaaaaagcgaaaacttcaagtcggtgataaaatggccgtacgtcac
ggtaataagggaattgtatcacgtattgttcgtgatgaagatctgccatttttggaagac
gggacccctgtagatattgtgctaaatccattaggtgttccatctagaatgaatatggga
caaatatatgaaacaatattgggatgggcaggtcataagctgggaataaaattttctacc
cctatatttgatggggcttcaatcgaacaaattactgaatatactagtaaggcaggatta
cctcacttaggaagcacctatctttatgatggggaaactggagaacgttttgataagcca
acgaccgtgggaattatttatatgttaaaacttggtcatatggtagacgacaagatgcat
gctcgttccataggtccttattcactgatcacccagcaaccgttagggggaaaagcgcaa
tttggaggacaacgttttggagaaatggaagtgtgggctctagagtcttttggagcttca
aacattctaagagaaatactgactgtaaaatctgatgatgtagtaggtcgttctaaaacc
tatgaatctattgttaaaggagaaactctgcctgaacccgggattcctgaatctttcaat
gtattgctccatgaacttaaaggactcggattaaacctccatcttgaagaataa
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