Candidatus Walczuchella monophlebidarum: FNIIJ_169
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Entry
FNIIJ_169 CDS
T03207
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
elv
Candidatus Walczuchella monophlebidarum
Pathway
elv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNIIJ_169 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elv03021
]
FNIIJ_169 (rho)
03019 Messenger RNA biogenesis [BR:
elv03019
]
FNIIJ_169 (rho)
Transcription machinery [BR:
elv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FNIIJ_169 (rho)
Messenger RNA biogenesis [BR:
elv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FNIIJ_169 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA_25
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
AID37447
UniProt:
A0A068DQD6
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All DBs
Position
170925..172103
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AA seq
392 aa
AA seq
DB search
MPLENKYRYRYRYRYRAANYEFEGIVASEGVLEIMQENYGFLRYSDFNYLSSPDDVYVSQ
SQIKLFSLKTGDTISGAIRPPKESEKYFPMIKIIKINGRSPYDIRERSSFEHMTPLFTEE
KLNLSDKNPTVSTRILDIFAPIGKGQRGMIGAPPKVGKTILLKDLANAIAANHPEVYLMI
LLIDERPEEVTDMQRSVKGEVVASTFDESEERHVKVANIVLQKAKRMVECNHDVVILLDS
ITRLARAYNTGAPASGKVLSGGVEANALHKPKRFLGAARNIEGVGSLSIIATAMIETGSK
MDEVIFEEFKGTGNMELQLDRKIANRKLYPAIDLVASSTRRDDLLLNDPTLQRMWILRKH
ISEMNPIEAMEFLIKRINQTQSNDEFLISMNK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcctttggaaaacaaatatcgttatcgttatcgttatcgttatcgtgcagcaaattat
gaatttgaaggaattgtggctagtgaaggagttcttgaaattatgcaagaaaattatgga
tttctaagatattcagattttaattatctctcgtctccagacgatgtttatgtttctcaa
tcgcaaattaaacttttcagtcttaaaacaggtgatacaatcagtggagcaattaggcca
cctaaagaaagtgaaaaatattttcctatgattaaaataattaaaattaacgggagatct
ccttatgacatacgtgagagatcttcttttgaacatatgacacctttatttacagaagaa
aaattgaatttgtctgataagaaccctactgtttctacgagaattttagatatttttgct
ccaatcggaaagggacaacgtgggatgattggagcccctcctaaagttggaaaaactata
ttattgaaagatctagctaatgctatagcagcaaatcatcctgaagtctatttaatgatc
ttattaatcgatgaacgtcctgaagaggtgactgatatgcaacgtagtgtaaaaggtgag
gtagtagcctcaacttttgatgaatcagaagaaagacatgttaaagtagcaaatattgtt
ctacaaaaggcaaaacgaatggtggaatgtaatcacgatgtagtgatattgctagattct
ataactcgtttagcaagagcgtataatactggagctccggcttcaggaaaagtcctttca
ggaggagtagaagctaatgctttgcataaacctaagagatttcttggtgctgctagaaat
atcgaaggcgtaggctctctttctattatagctacagctatgatagaaactgggtcaaaa
atggacgaagttatctttgaagagtttaagggtacagggaatatggaattacaacttgat
agaaaaatagctaatagaaaattatatcctgctatagatctagttgcttcaagcacccgg
agggatgatttattattgaacgatcctacattgcagagaatgtggattttgcgaaaacat
atttcagagatgaatcctatagaagctatggaatttttgataaaacgaattaaccaaact
caaagtaacgacgaattccttatttcgatgaataagtga
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