Candidatus Walczuchella monophlebidarum: FNIIJ_190
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Entry
FNIIJ_190 CDS
T03207
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase (pnpASE)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
elv
Candidatus Walczuchella monophlebidarum
Pathway
elv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNIIJ_190 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elv03019
]
FNIIJ_190 (pnp)
03016 Transfer RNA biogenesis [BR:
elv03016
]
FNIIJ_190 (pnp)
Enzymes [BR:
elv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FNIIJ_190 (pnp)
Messenger RNA biogenesis [BR:
elv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FNIIJ_190 (pnp)
Transfer RNA biogenesis [BR:
elv03016
]
Prokaryotic type
tRNA degradation factors
FNIIJ_190 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
PCB_OB
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AID37464
UniProt:
A0A068DST8
LinkDB
All DBs
Position
complement(188410..190524)
Genome browser
AA seq
704 aa
AA seq
DB search
MKKSSIISEKISITDGRRIHIETVFLAKQSDGSVVVKMGNTMILATVVASKETIKKNPGF
LLLTVDYKEKYYATGKIPGVFFKREGRTTYREILITRIVDRVLRPFFPKKLHAEIQIMIS
LLSYDNSVFPDGLAGLAASSALAVSDIPFNGPISEVSIVRWNKKFIIHPNIEEILKYEID
LIVGASKEALIMIEGEMKEISEKEILSAIAFAQEVIKDQVNAQIRLAYKLEKFRTKRFYE
VQDKELDEKIHKITYDKTYKASKYSYDKKQLIEKYRKIFNEVKLHFTEKMWKEKESLAHY
YYEEIKRKVIRTLVLSENHRIDGRSSKEIRPIQCWVDYLPSVHGSAIFSRGETQSLTTVT
LGSSGDANRIDNALEKEKFYIHYNFPPFSTGDVRTIRGISRREIGHGNLAQRALKNVIPS
GNPYTIRMVSEIFESNGSSSMATICAGTLALMDAGIPIKLPVSGISIGLIIEHGKEVILY
DILGEEDHIGDMDLKVAGTAKGITACQMDIKIEEGISFKILEKALKQAYEGRIYILNEML
KTLSLPRKSIKPHAPKISVLEIPKEFIGSVIGTGGKIIQEIQDETNTVISIEEKGKIGFV
EIVGKHQDKISKAVQRIKAISFVPKRKGIYDAKVKSIKKFGAFVEIIPGKEYLLNISEIN
WERLDKVEDVLKIGDQIQVKLMGIDDSNGKIRISRKVLLPKGRK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcaagtattatttcagaaaaaatatctataacagacggtaggaggattcat
atagaaacggtgtttctagctaaacagtctgatggttccgttgttgtaaaaatgggaaat
actatgattttggctactgttgtagcttccaaagaaactataaagaaaaatccaggtttt
ttacttcttactgtagactataaagaaaaatattatgcgaccggtaaaattcctggggtc
tttttcaagagagaagggcgtacgacgtatagagaaattttaatcactaggattgtagat
cgtgtattaagacctttttttcccaaaaaattacatgctgaaatccagattatgatttca
ctgctttcttatgataactcagtcttcccagatggattagcaggattagcagcttcttca
gcattagcggtttcggatataccctttaacggacctatttccgaggtcagcattgtccgt
tggaataaaaaattcattattcatcccaatatagaagaaattttaaaatatgagatcgat
ctgattgttggagcttctaaagaagcccttattatgatagaaggggagatgaaagaaata
tcagaaaaagaaatattatccgcgattgcttttgcacaggaagttataaaagatcaggta
aatgcacagatacgtctagcctataaactagaaaaatttaggactaaaagattttatgaa
gtacaggataaagaacttgatgagaaaattcataagataacttatgataaaacatataaa
gcttcaaaatattcttatgataagaaacaacttattgaaaaatacaggaaaatattcaat
gaagtaaagttgcactttacagaaaaaatgtggaaagaaaaggaaagtttagcacattat
tattacgaagaaataaagagaaaagttatacggacgttggtactatctgaaaatcatcgc
atagatggacgttcttcaaaagaaattagacctatacaatgctgggtagactatcttcct
agcgtgcatggttctgcgatattctctcgcggagagactcaatcgttaactaccgtaaca
cttggatcatcgggtgatgccaaccgtatagataatgcccttgaaaaagaaaaattttac
atccattataattttcctcctttttctactggagatgtacgaactatacgaggaatatca
cgtcgtgaaataggacatggaaatttggcgcaaagggccctaaaaaatgttattccttca
ggaaatccttacactattcgtatggtatctgagatttttgaatctaatggatcctcttct
atggcgactatttgtgcaggaacccttgctcttatggacgccggaatacctattaaacta
cctgtttcagggatttctattggattaataatagagcatggtaaagaagtaatactttac
gatattttaggtgaagaggatcatattggggatatggatcttaaagtagctggtacggca
aaaggaattactgcttgtcaaatggatattaaaatagaagaagggatttctttcaaaatt
cttgaaaaagctctaaaacaagcctatgaaggacgtatatatattttaaatgaaatgcta
aaaacattatctctccccagaaaatctataaaaccccatgctcctaagatatctgtttta
gaaattcctaaagagtttataggatcagttattggtacagggggaaaaattattcaagaa
attcaggacgaaactaatactgtaatttctatagaagaaaaaggaaaaattggatttgta
gaaattgttggaaagcatcaagacaaaatttctaaagcggtacaaagaattaaagcgatt
tcttttgttccaaaaagaaagggtatatacgatgctaaggttaaatcaattaaaaaattc
ggggcttttgtagagataattcctggtaaagaatatctccttaacatatcggagattaat
tgggagcgattggataaagtcgaagatgttctaaaaataggagatcaaatacaggtaaaa
ctcatgggaattgatgatagtaatggaaaaattagaatttctagaaaagttcttttacct
aaaggtagaaaataa
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