Escherichia coli W: ECW_m0344
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Entry
ECW_m0344 CDS
T02002
Symbol
lafS
Name
(GenBank) RNA polymerase, sigma 28 (sigma F) factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
elw
Escherichia coli W
Pathway
elw02020
Two-component system
elw02026
Biofilm formation - Escherichia coli
elw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
elw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECW_m0344 (lafS)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECW_m0344 (lafS)
09142 Cell motility
02040 Flagellar assembly
ECW_m0344 (lafS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elw03021
]
ECW_m0344 (lafS)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
elw02035
]
ECW_m0344 (lafS)
Transcription machinery [BR:
elw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECW_m0344 (lafS)
Bacterial motility proteins [BR:
elw02035
]
Flagellar system
Flagellar assembly proteins
Stator
ECW_m0344 (lafS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
GerE
Motif
Other DBs
NCBI-ProteinID:
ADT73885
UniProt:
E0J3M3
LinkDB
All DBs
Position
351224..351940
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AA seq
238 aa
AA seq
DB search
MLQDVFESEEFAAAPVLTPQQESHYLQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMG
LLNAIRRYGLPDEGFAGYAVHRIRGAILDELRALDWRPRQLRQKYHQMKDLIRETRKKLG
HEPEWSELAVEGISHEDYLEYQQLEGAETLASLDELLNGEGPGIPLVGRELEDQFVTQQM
LQQALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFVYPN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgctacaggatgtattcgagtcggaagaatttgctgccgcgccggtattaaccccgcag
caggagagccactacttgcaggcctatttaccgttggtgcgtaaagtggtgcggcaactt
gccccgcagtgtaattgcattattgatcgtcaggatatggaacaaacggcgttaatgggg
ctgcttaatgccatccgccgctacgggctgccggacgaaggttttgcgggctatgccgtg
catcgtattcgcggcgcgatcctggatgagctgcgcgctctcgactggcgaccgcgccag
ctgcgacagaaatatcatcagatgaaagatctgattcgcgaaacgcgcaaaaaactgggg
cacgaaccggagtggtcagaactggccgtggaagggatctcacatgaagattatctcgaa
tatcagcaactggaaggggcggaaacgctcgccagcctggacgaactgctgaacggcgaa
gggccaggcattccgcttgttggccgggagctggaagatcagtttgtcactcagcaaatg
ctgcaacaggcgctttcacaattaagcgaaaaagagcaactgatcctctccatgtattac
cagcatgagatgaatctcaaagagattgcgctggtattagggctaaccgaggcccgaatt
tgtcaactgaataaacagatcgcgcagaaaattcgtgattttgtctatccgaattaa
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