Escherichia coli W: ECW_m2170
Help
Entry
ECW_m2170 CDS
T02002
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
elw
Escherichia coli W
Pathway
elw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ECW_m2170 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elw03400
]
ECW_m2170 (sbcB)
Enzymes [BR:
elw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
ECW_m2170 (sbcB)
DNA repair and recombination proteins [BR:
elw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ECW_m2170 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECW_m2170 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECW_m2170 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADT75613
UniProt:
E0J164
LinkDB
All DBs
Position
2221363..2222790
Genome browser
AA seq
475 aa
AA seq
DB search
MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ
PGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNF
YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNA
HDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR
GNTSWVAPLAWHPENRNAVIMVDLAGDISLLLELDSDTLRERLYTAKTDLGDNAAVPVKL
VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPS
DNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLD
YAEQQRWLEHRRQVFTPEFLQGYADELQMLAQQYADDKEKVALLKALWQYAEEIV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgacggtaagcaacaatctacctttttgtttcacgattacgaaacctttggc
acgcaccccgcgttagatcgccctgcacagttcgcagccattcgcaccgatagcgaattc
aatgtcatcggcgaacccgaagtcttttactgcaagcccgcggatgactatttaccccag
cctggagcagtattaattaccggtattaccccgcaggaagcacgggcgaaaggagaaaac
gaagccgcgtttgccgcccgtattcactcgctttttaccgtaccgaagacctgtattctg
ggctacaacaatgtgcgtttcgacgacgaagtcacacgcaacgttttttatcgtaatttc
tacgatccttacgcctggagctggcagcatgataactcgcgctgggatttgttggatgtt
atgcgtgcctgttatgccctgcgcccggaaggaataaactggcctgaaaatgatgacggt
ctaccgagctttcgccttgagcatttaaccaaagcgaatggtattgaacatagcaacgcc
cacgatgcgatggctgatgtgtacgccactattgcgatggcaaagctggtaaaaacgcgt
cagccacgcctgtttgattatctctttacccatcgtaataaacacaaactgatggcgttg
attgatgttccgcagatgaaacccctggtgcacgtttccggaatgtttggagcatggcgc
ggcaataccagctgggtggcaccgctggcgtggcatcctgaaaatcgcaatgccgtaatt
atggtggatttggcaggagacatttcgctattactggaactggatagcgacacattgcgc
gagcgtttatataccgcaaaaaccgatcttggcgataacgccgccgttccggttaagctg
gtgcatatcaataaatgtccggtgctggcccaggcgaatacgctacgcccggaagatgcc
gaccgactgggaattaatcgtcagcattgcctcgataacctgaaaattctgcgtgaaaat
ccgcaagtgcgcgaaaaagtggtggcgatattcgcggaagccgaaccgtttacgccttca
gataacgtggatgcacagctttataacggctttttcagtgacgccgatcgtgcagcaatg
aaaattgtgctggaaaccgagccgcgtaatttaccggcactggatatcacttttgtcgat
aaacggattgaaaagctgttgttcaattatcgggcgcgcaacttcccggggacgctggat
tatgccgagcagcaacgctggctggagcaccgccgccaggtcttcacgccagagttttta
cagggttatgcagatgaattgcagatgctggcacaacaatatgccgatgacaaagagaaa
gtggcgctgttaaaagcgctttggcagtacgcggaagagatcgtctaa
DBGET
integrated database retrieval system
