Escherichia coli W: ECW_m3550
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Entry
ECW_m3550 CDS
T02002
Symbol
rimN
Name
(GenBank) predicted ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
elw
Escherichia coli W
Brite
KEGG Orthology (KO) [BR:
elw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elw03009
]
ECW_m3550 (rimN)
03016 Transfer RNA biogenesis [BR:
elw03016
]
ECW_m3550 (rimN)
Enzymes [BR:
elw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
ECW_m3550 (rimN)
Ribosome biogenesis [BR:
elw03009
]
Prokaryotic type
Other maturation factors
ECW_m3550 (rimN)
Transfer RNA biogenesis [BR:
elw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECW_m3550 (rimN)
Prokaryotic type
ECW_m3550 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
ADT76901
UniProt:
E0J763
LinkDB
All DBs
Position
complement(3643812..3644384)
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AA seq
190 aa
AA seq
DB search
MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL
IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD
HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD
ALTGELFRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataacctgcaaggagacgctatcgcagctgcgatagatgtcctcaatgaagaa
cgtgtcatcgcctatccaacggaagccgttttcggtgtcgggtgcgatcctgatagcgaa
acagcagtgatgcgactgttggagttaaaacagcgtccggttgataaggggctgatttta
atcgcggcaaattacgagcagcttaaaccctatattgatgacaccatgctgactgatgcg
cagcgtgaaaccattttttcccgctggccaggtcctgtcacctttgtctttcccgcgcct
gcgacaacaccgcgctggttgacgggccgctttgattcgcttgctgtacgagtcaccgac
catccgttggtggttgctttgtgccaggcttatggtaaaccgctggtttctaccagtgcc
aacttgagtggattgccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgcg
gcgttcccggttgtgcctggtgaaacgggggggcgtttaaatccttcagaaatccgcgat
gccctgacgggtgaactgtttcgacaggggtaa
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