Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_0149
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Entry
CDCO157_0149 CDS
T02122
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elx03016
]
CDCO157_0149
Enzymes [BR:
elx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CDCO157_0149
Transfer RNA biogenesis [BR:
elx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CDCO157_0149
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AFJ27199
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All DBs
Position
complement(165823..166353)
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AA seq
176 aa
AA seq
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MSDPQRLFFAIDLPAEIREQIIHWRATHFPLEAGRPVAADNLHLTLAFLGEVSAEKEKAL
SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR
PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWVLTQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccgcaacgtctgttctttgctatcgacttacctgcagaaatccgcgaacag
attatccactggcgcgccacacacttcccacttgaggcgggacgtccggtcgccgccgat
aatttgcatctgactctggcatttttaggcgaagtgagcgcagagaaagagaaggcgctt
tctcttttagccggacggattcgtcaacctggtttcacactcacgcttgatgacgccggc
caatggctgcgttcgcgtgtggtgtggttagggatgcgtcagccgccacgcggcttaatc
cagctggcgaatatgctccgttcacaggctgcccgcagcggttgttttcaaagcaatcgt
ccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgacaatcccgccg
ccaggttttaactggtcatatgcggtgacggagttcaccctttacgcctcctcgtttgcc
cgtggacgcacacgctacacgccgctaaaacgctgggtgctaacgcaataa
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