Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_4477
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Entry
CDCO157_4477 CDS
T02122
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx00300
Lysine biosynthesis
elx00470
D-Amino acid metabolism
elx01100
Metabolic pathways
elx01110
Biosynthesis of secondary metabolites
elx01120
Microbial metabolism in diverse environments
elx01230
Biosynthesis of amino acids
Module
elx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDCO157_4477 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDCO157_4477 (dapF)
Enzymes [BR:
elx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CDCO157_4477 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AFJ31529
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Position
4715172..4715996
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctagctgatcggcacctgggggta
gggtttgaccaactgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggcgcacgctgcttt
gcccgttttgtgcgtctgaaagggctgaccaataagcgcgatatccgcgtcagcaccgcc
aacgggcggatggttcttaccgtcaccgatgatgatctggtccgcgtaaatatgggcgaa
cccaacttcgaaccttctgccgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccacattgc
gtgattcaggtcgatgatgtcgatactgcggcggtagaaacactggggcctgttctggaa
agccacgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcatgtgcggcggttgcagtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactcccaggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
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