Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_4798
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Entry
CDCO157_4798 CDS
T02122
Name
(GenBank) lysine decarboxylase 1
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx00310
Lysine degradation
elx01100
Metabolic pathways
elx01110
Biosynthesis of secondary metabolites
elx01120
Microbial metabolism in diverse environments
Module
elx_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
CDCO157_4798
Enzymes [BR:
elx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
CDCO157_4798
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AFJ31848
LinkDB
All DBs
Position
complement(5098899..5101046)
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AA seq
715 aa
AA seq
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MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRDDLLKLIENNARLCGVIFDWD
KYNLELCEEISKMNENLPLYAFANTYSTLDVSLNDLRLQISFFEYALGAAEDIANKIKQT
TDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDI
SISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILI
DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVH
AVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIY
ETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA
GKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID
NEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG
IDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHH
NLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVM
PGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEESKK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttattgcaatattgaatcacatgggggtttattttaaagaagaacccatccgt
gaacttcatcgcgcgcttgaacgtctgaacttccagattgtttacccgaacgaccgtgac
gacttattaaaactgatcgaaaacaatgcgcgtctgtgcggcgttatttttgactgggat
aaatataatctcgagctgtgcgaagaaattagcaaaatgaacgagaacctgccgttgtac
gcgttcgctaatacgtattccactctcgatgtaagcctgaatgacctgcgtttacagatt
agcttctttgaatatgcgctgggtgctgctgaagatattgctaacaagatcaagcagacc
actgacgaatatatcaacactattctgcctccgctgactaaagcactgtttaaatatgtt
cgtgaaggtaaatatactttctgtactcctggtcacatgggtggtactgcattccagaaa
agcccggtaggtagcctgttctatgatttctttggtccgaataccatgaaatctgatatt
tccatttcagtatctgaactgggttctctgctggatcacagtggtccacacaaagaagca
gaacagtatatcgctcgcgtctttaacgcagaccgcagctacatggtgaccaacggtact
tccactgcgaacaaaattgttggtatgtactctgctccggcaggcagcaccattctgatt
gaccgtaactgccacaaatcgctgacccacctgatgatgatgagcgatgttacgccaatc
tatttccgcccgacccgtaacgcttacggtattcttggtggtatcccacagagtgaattc
cagcacgctaccattgctaagcgcgtgaaagaaacaccaaacgcaacctggccggtacat
gctgtaattaccaactctacctatgatggtctgctgtacaacaccgacttcatcaagaaa
acactggatgtgaaatccatccactttgactccgcgtgggtgccttacaccaacttctca
ccgatttacgaaggtaaatgcggtatgagcggtggccgtgtagaagggaaagtgatttac
gaaacccagtccactcacaaactgctggcggcgttctctcaggcttccatgatccacgtt
aaaggtgacgtaaacgaagaaacctttaacgaagcctacatgatgcacaccaccacttct
ccgcactacggtatcgtggcgtccactgaaaccgctgcggcgatgatgaaaggcaatgca
ggtaagcgtctgatcaacggttccattgaacgtgcgatcaaattccgtaaagagatcaaa
cgtctgagaacggaatctgatggctggttctttgatgtatggcagccggatcatatcgat
acgactgaatgctggccgctgcgttctgacagcacctggcacggcttcaaaaacatcgat
aacgagcacatgtatcttgacccgatcaaagtcaccctgctgactccggggatggaaaaa
gacggcaccatgagcgactttggtattccggccagcatcgtggcgaaatacctcgacgaa
catggcatcgttgttgagaaaaccggtccgtataacctgctgttcctgttcagcatcggt
atcgataagaccaaagcactgagcctgctgcgtgctctgactgacttcaaacgtgcgttc
gacctgaacctgcgtgtgaaaaacatgctgccgtctctgtatcgtgaagatcctgaattc
tatgaaaacatgcgtattcaggaactggctcagaatatccacaaactgattgttcaccac
aatctgccggatctgatgtatcgcgcatttgaagtgctgccgacgatggtaatgactccg
tatgctgcattccagaaagagctgcacggtatgaccgaagaagtttacctcgacgaaatg
gtcggtcgtattaacgccaatatgatccttccgtatccgccgggagttcctctggtaatg
ccgggtgaaatgatcaccgaagaaagccgtccggttctggagttcctgcagatgctgtgt
gaaatcggcgctcactatccgggctttgaaaccgatattcacggtgcataccgtcaggct
gatggccgctataccgttaaggtattgaaagaagaaagcaaaaaataa
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