Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_4947
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Entry
CDCO157_4947 CDS
T02122
Name
(GenBank) putative RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
CDCO157_4947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
KIF21A
DUF1319
Anti-TRAP
HypA
Motif
Other DBs
NCBI-ProteinID:
AFJ31998
LinkDB
All DBs
Position
5269353..5275694
Genome browser
AA seq
2113 aa
AA seq
DB search
MLPSVVSRQVADSVAAFLRAAFPLNSPLFNGENNDNVSMLEQFLAQPETLLKGPYLSAQL
PFRKSDLPLNFFPNLTLPFPPHAHQARAFQRLGSDAPQPTLVATGTGSGKTECFMFPLLN
HCAGASQAGVKAIIIYPMNALATDQASRFAKTIASDPQLHGKVTVGLFVGDSEIEPSKKM
SAEKVITCKHTLRESPPDILLTNYKMLDYLLMRPGDQPLWRYNQPGSLRYLVVDELHTFD
GAQGSDLACLVRRLKHHIGVDNQRFACVGTSATVGDELGQLLDYAKTIFDQPFTDDAVIR
EDRYTAAEYLQNYAIAYSQYPGPEVASALDPQSYATPVAYLNGQIPLWFPDSDLQLPDDL
ESDDGREKRIALGSLLRRHSVMHVLLHDLQGGILSERECLENLQVMLAESADHARRVLQS
ILALIAQARLEVPETEHDRQKRLQAKKARPVLPFVQLRSQLWLREMRRLVASVAKTPRLV
FADDVAVEDREHYLPVIHCRDCHATGWASLRHGQSVQLETDLDGIYRQFFEKGRSIVLAF
PDNNEKAVSGAHQKLCPTCLKLNRQSSVQCGHCGHTELLQVLIPDMLKERKDELEFANEC
PYCNSKQGISILGSRAASLSAVMIHQLYGSQFNEHKKLITFSDSVQDAAHRASFFTARTW
PLMIRGQISSVLSEKETLPLDAFAARVCQQTRERSPDDAHFAANVIAPNMQWLNDYQTLK
NEGKLAENSDLPELVSLRLDWEVYSEFTLRARIGRTLEATGYAVAGVDKDRFNPAITALH
QQLCEELGDEMSGVSVEQVAHLALGVIWYQRQAGAVMHPAFESYRRDGTTFMMTQKERTS
RYMPSIGPKTRKPAYASFEKINGFHRLIGAKSNPSWYQHWINRTLSNGNNLFISSVAETV
LRRLFTALKIAGVVKDFDTKGREAWGLVPSALVVSRDVVQLNCSCCREVVRAPADQGWQW
RNAPCLSLRCEGRYQEVDNTATWRWENMDIARVQGAEHTGLLSREDREVTEKSFYRGNQP
WNINLLSATPTLEMGIDVGDLSTVLLCSVPPAQANYLQRIGRAGRKDGNALNITVAEGNP
HDQFFFEEPLEMMQGQVQAPGVFLNATAILERQLAAFCMDNWVKTGVPESAICKNVKQML
DELEFGRKSGFPYNLLRYIEQHHAEIAAQFTAIFPDLAAETRQQLLSYLQGAPGQRSLVQ
RIEEALKLLVEDRKSLRSRIDKLKRSIDKLENAPRDQNFDSDMRELTSERQALMALVNQI
NNKQTLNFLTDEGLLPNYAFPEAGITLRSVLWRRKEGGEAREYQNTTFEYERPASTALAE
LAPLNNFYAGGHKVEIEQIDLKVSEPENWRICSHCNYSENIDQTGDQHKYCPKCGTPGWA
DAGQKTTLLKLRQVYARASARDSQISDESDSREPAFFQRQLLVSFEKEDVSAAYAIEEGE
VPFGFEFLSKVTLRDINFGKMADDANELMIAGEAKKRTGFKVCLGCGMVQRPRDHEPRHD
LSCKYRTEPEKAKFEDYLYLYRQLESEALRILLPVSSYSNDRVVEASLGAAIQLGLKHYF
KGNVDHLKGVVYREPENEGESWRQYLVIYDTVPGGTGSLKELMRTPDNLLKLLELAYQAI
VECSCNNDTHKDGCYRCVYAYRDRGRMKYVSRDQARLLLAKILQARDSIRVIDSIKNISL
EAMMGSELEKRFISCLQENKNLIVSRSYAHQGAGWIINTRSEPMMSWHLKAQVDLGAKEA
VGIPCRPDYVLYPLMQSDAIKPVAIFLDGFAFHKNSVAEDVQKRQAIRDSGNFWVWTVTW
ADLKEPGLKHVQDVLGLGHNPDMKQPKFYNLFHDTNFAALEASFRERNSFALLLDYLADP
GGRTQLWQRMAAAHAWVWLDVKKSQDAGTKQKYAYEMQENAPAWRLAELLPDEPFVFGGL
LDSCNSSQQFIELASVLPQQAIKPTTSVAQMRSWLRLHICFDDRYTQDDGYEAGLNGFWR
LVNLLQFLPDMTFTSRKAVHLPQESVDTKVSATPEAVPETDESWAEIIEFGLLSAEEIAL
LQSHSLSAPTLGYELQNDEGEIIAEADLAWPSQKWALIIDNQEFIPLFTTRGWHVAFGPI
DENTLQHLSGGDK
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgtccgttgtcagtcggcaggtcgccgacagcgttgccgcctttttacgggcg
gcgttcccgctaaacagcccgctgtttaacggtgagaataacgataatgtctcaatgctg
gagcaatttctggcccagccggaaacgctgctgaaaggaccatacctttccgcccagttg
ccgtttcgtaaaagtgacttaccgctgaattttttccctaatctgacgctgccgttcccg
ccgcacgcgcatcaggcccgggcatttcagcgtctgggaagcgacgcgccacagccgacg
ctggtcgcaaccggtaccggctccggtaaaacagaatgttttatgttcccgctgctcaac
cactgcgcgggcgcgtcacaagccggggttaaagcgattatcatctacccgatgaacgcc
ctggcaaccgatcaggccagccgtttcgccaaaaccatcgccagcgatccacaactgcat
ggcaaggtgaccgtcggcctgtttgtcggcgacagcgaaatcgaacccagcaaaaaaatg
tcggcagaaaaggtcattacctgtaagcacacgctgcgcgaaagcccgccggacatcctg
ttgaccaactacaaaatgctcgactacctgctgatgcgccctggcgatcagccgctctgg
cgttacaaccagcccggttcattgcgttacctggtcgtggatgaattgcatacgtttgat
ggcgcgcaagggtcggatctggcctgtctggtgcgacgtttgaagcatcacataggtgtg
gataaccaacgattcgcctgcgtcgggacatcagctaccgtcggcgacgaactggggcaa
ctgctcgattacgcaaaaacaatctttgaccagccgtttaccgatgacgccgttattcgc
gaagatcgctacacggcagcggagtacttgcagaattacgccattgcgtacagtcagtat
ccggggccggaggtcgcttcggccctggacccgcagagttacgctaccccggtagcgtat
cttaacgggcaaatccctttgtggttccccgacagcgacttgcaactcccggacgatctg
gagagcgacgacgggcgtgaaaagcgtattgcgctggggtcactgttacgccgccacagc
gtgatgcatgtcttactccatgatctgcaaggcgggatcctctctgaacgagagtgtctg
gaaaatctccaggtcatgctggcagaaagcgccgaccatgcccgacgcgtgctgcaaagc
attctggcactgatcgcgcaggcacgtctcgaagtaccggaaacggaacacgatcggcaa
aaacgtctccaggcgaagaaagcgcgtccggtgctgccgtttgtgcaactgcgctcccag
ttgtggcttcgtgagatgcgtcgtctggtcgccagcgtggcgaaaacgccccgactggtg
tttgccgatgatgtggcggtggaagatcgcgaacactatttgccggttatccactgccgt
gactgccacgcaactggctgggccagcctgcgtcatgggcaaagcgttcagttggaaaca
gacctcgacggcatttatcgccagttctttgaaaaagggcgctccatcgtccttgctttc
ccggataacaacgaaaaagcggtcagtggcgcacaccagaaactgtgtcctacctgtctg
aaactgaaccgacagtccagcgtccagtgtggacattgcggtcatacggaactgttgcag
gtactgatcccggatatgctcaaagagcgtaaggacgagctggagtttgctaatgaatgc
ccgtactgcaacagcaaacaggggatttcgattctggggtcacgggctgccagtctgtcg
gcggtgatgattcaccagctttatggcagccagttcaacgaacataaaaagctgattacg
ttttctgactcggtacaagacgccgcgcatcgtgccagcttctttactgcccgtacctgg
ccgctgatgattcgtgggcaaatctccagtgttcttagcgaaaaagagacattaccgctg
gatgcgttcgcggcgcgtgtttgccaacaaacgcgtgaacgttcaccggacgatgctcat
tttgcagcaaacgtcatcgcaccaaatatgcagtggctgaatgattatcagacgctgaaa
aatgaaggcaaactggcggagaactccgatctgccggagctggtttccctgcgcctcgac
tgggaggtgtacagcgaatttaccctgcgcgcgcgtatcggacgtacgctggaagccacc
ggttatgccgttgccggagtggataaagatcgcttcaatccggcaattaccgccctgcat
caacagctttgtgaagagctgggtgatgagatgtctggtgtgagcgtcgagcaggtagcg
cacctggcgctgggggttatctggtatcaacgccaggccggggccgttatgcatccggcg
ttcgaaagttatcgccgtgatggcacgacctttatgatgacgcaaaaagagcgtacctcg
cgctatatgccttctatcggtccgaaaacgcgtaaaccggcttatgcgtcgtttgaaaaa
attaatggtttccatcgcctgattggcgcgaagtctaaccccagttggtatcagcattgg
atcaatcgcacgctgagtaacggcaataatctgtttatcagtagcgttgcggaaacagtg
ttacgacgcctgtttacggcgttgaaaatagccggagtagtaaaagattttgacaccaaa
gggcgtgaagcctggggactggtgccttcggcgctggtggtgagccgtgacgtcgttcag
cttaattgctcatgttgccgtgaggttgtccgggctccggccgatcaaggctggcagtgg
cgtaatgcgccttgtctctctttacgttgtgaaggtcgttaccaggaagtcgacaatacg
gcgacctggcgttgggagaacatggacatcgcgcgcgtacagggcgcagaacacacgggg
ctgcttagccgtgaagatcgcgaagtcaccgaaaaatcgttctaccgcggcaaccaaccg
tggaatatcaacctgttgtcggcaacaccgacgctggagatgggtattgacgttggggat
ctttccaccgttttactctgttctgtcccacctgctcaggccaactacttgcagcgtatt
ggtcgcgccggtcgtaaagatggtaacgcgttaaacattaccgtggcagaagggaacccg
cacgatcagtttttctttgaagaaccactggagatgatgcagggccaggtgcaggctcct
ggcgtcttccttaatgcaacggctattctcgaacgccagctggcagctttttgtatggat
aactgggtgaaaaccggtgtaccagaatccgctatctgtaaaaacgtcaaacagatgctg
gatgagctggagttcgggcgtaaatcgggttttccgtataacttactgcgatatatcgaa
cagcatcatgcggagattgctgcgcaatttacggcaatcttccccgatcttgccgcagaa
actcgccaacagctgttgtcttatcttcagggcgcgccaggacaacgctcgctggtgcag
cgtatcgaagaagcgttaaaactgctggtggaagatcgcaaatctttgcgctcacgcatc
gataaactcaagcgcagtatcgataaactggagaacgcgccgcgcgatcaaaactttgat
agcgatatgcgcgagttaacttcggaacggcaggcgctgatggcgctggtcaatcaaatc
aacaataagcaaacgctgaatttcctcacggatgaaggtctgctgcctaactacgccttc
ccggaagccggtattacgttacgttctgtgctctggcggcgtaaagaaggcggggaagca
cgtgaatatcaaaacaccactttcgaatatgaacgcccggcatcaacggcgctggctgag
ctggctccgctgaataatttctatgccggtgggcataaagttgaaattgagcagatagac
ctgaaggtctctgagccggagaactggcgtatctgtagccactgtaactacagcgaaaat
atcgaccagacgggcgaccagcataaatattgcccgaaatgtggcacaccggggtgggcc
gatgccggacaaaaaaccacgctgctgaaacttcgccaggtttatgcccgcgccagcgca
cgtgatagccagatcagcgacgagagcgacagccgtgaacctgctttcttccagcgtcag
ctattggttagtttcgaaaaagaagatgtatcggcggcatacgcgattgaggaaggcgaa
gttccgtttggttttgaatttttaagcaaagtcaccctgcgggatatcaacttcggcaaa
atggcggatgatgccaatgagttgatgattgccggagaagcgaagaagcgaaccgggttt
aaagtttgcctcgggtgcggcatggtgcagcgtcctcgcgatcatgaaccacgtcatgat
ttgagctgcaaatatcgcacggaaccggaaaaggcgaagttcgaagattatctctacctc
tatcgccagctggagtcagaagcgttgcgtattctgctcccggtaagcagttacagtaat
gaccgtgtcgtggaggcttctcttggggcggcgatccagctcggtcttaaacattacttc
aaggggaatgtcgatcacctgaaaggcgttgtgtaccgcgagccggaaaatgaaggcgaa
tcctggcggcagtatctggtgatttacgataccgtcccgggggggactggttctcttaaa
gaactgatgcgcactcccgacaatttgctgaaattacttgaactggcctatcaggcaata
gtggaatgcagttgcaacaatgatacgcataaagatggttgttatcgttgcgtttacgct
taccgtgaccgtgggcgcatgaagtatgtctcccgcgatcaggcgcgtctcttgctggcg
aaaattttgcaggcaagagattcgatacgggtaattgattccatcaaaaacatttccctc
gaagccatgatgggcagtgagctggaaaaacggtttattagctgcctgcaagaaaataaa
aacctgattgtcagtcgcagttacgcgcatcagggcgctgggtggattattaacacccgc
agcgaaccgatgatgagctggcatcttaaagctcaggtggatttaggcgctaaagaggcg
gtggggatcccttgtcgcccggattacgtgctatatccgcttatgcagtctgatgccatt
aaaccggtggctattttccttgatggctttgcgttccacaaaaatagcgtcgcagaggat
gtgcaaaaacgccaggcgattcgggatagcggtaatttctgggtgtggacagtcacgtgg
gccgatctcaaagagccagggcttaaacatgttcaggatgtcctgggacttgggcataac
ccggatatgaaacagcctaagttttataacctgtttcatgataccaactttgcggccctt
gaagcgtcgttccgggaacgcaacagttttgcactgctgctggattatctcgccgatccg
ggcggaagaacgcagttatggcagagaatggctgctgcacatgcctgggtgtggttggat
gtgaagaagtcacaggacgcgggaacgaaacaaaagtatgcctatgaaatgcaggaaaac
gcgccagcttggcggctagcagagcttttgccagacgaaccgtttgtctttggtggttta
ctcgatagctgtaactcatcgcagcaatttattgagctggcttcggtgttaccacaacaa
gccattaaaccgacgaccagcgtcgcacaaatgcgcagctggctgcgtttgcatatctgt
tttgacgatcgctatacgcaggatgacggttatgaagcgggactcaatggcttctggcga
ctggtaaacctgttacagttcctgccggatatgacctttaccagccgtaaagccgtgcat
ttaccgcaggaaagcgttgacactaaagtttcggcaacgccagaggcagtaccagagact
gatgagagttgggctgagattattgagtttggcttattaagcgctgaagagatcgcgttg
cttcagtctcattctctctctgcgccgactctcggctacgaattgcaaaatgatgaaggt
gaaattattgcggaagccgatctcgcctggccatcacaaaaatgggcattgattattgat
aatcaagaatttattccattattcacaaccaggggttggcacgttgcattcgggccaatt
gacgaaaatacattgcaacatctgtccggaggtgacaaatga
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