Epinephelus lanceolatus (giant grouper): 117245812
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Entry
117245812 CDS
T07331
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117245812
03036 Chromosome and associated proteins [BR:
ely03036
]
117245812
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ely03037
]
117245812
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117245812
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117245812
UBL E3 ligases
117245812
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117245812
Cilium and associated proteins [BR:
ely03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117245812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117245812
NCBI-ProteinID:
XP_033465245
LinkDB
All DBs
Position
20:complement(36861145..36869176)
Genome browser
AA seq
1736 aa
AA seq
DB search
MPLTVRTSARRRRKTPDEKRPGESTSAAQVMAPTRMKLRVRRRDNAAAGAAAGGGQPEEE
EERSRESSGRSSRRKTTTSTTAAAASSSSSPPPSSSSASASARAVMAAEEASPDSKCPIC
LDRFNNLAYLDRCLHRFCFPCIQEWSHNKAECPLCKQPFASILHSVRAEDDFKEYTLRPA
PANSSVAATVAMVAAMASAARSDHQMRLMLRRHRGPDSGETNTRRRRRERGGRGRRSGVW
EWYLDSPPLALPPLPHHPAVSPVVAEDSEEGEDLEEQRIRGGADLAERGVIFEGLTGLGG
AVAPVGPNDRASRRLMTRLVARQRLQREGGTVRRLRERETVAFRRALYRSGIRVRGVAGI
NGNGNQGQQQQRDITAESFRRNPTHLNRLRPWLRRELTVLYGAHGSLVDIVQRIIMARLA
RHGLEDTPTVEEELRPFLLARTDHFLHELVSFARSPLSLENYDLQAVYEPPAAALELDGT
SSSSESSSVIAISEGEEEERQVGGRSEERQLVRAGGAHDDVIQAGSCLSLSAWDDETPGP
SYSTAEPSCSLASLSFSPAPQEAANEEEAGEKRDEEEECLIVGYKKPIAERTPELVQLSS
DTEEEEEKKKEEENAAEKPPSLPSTTPPLSYLPTIPPSTSGACSREQDDQPKEKDGEHRS
HARSWSGSSGRNSVCTLSPVTPGESELRRESWRDRKSCSEVTREKRRKKKRRRRGRDRSG
DRLRKSGTLYNPNRSIYPALMRHHSPSPFHSSIESGSPLPPSPDDSSWEYPCSQVSPLTS
SVSSPSRSFSSSPLCSSPQPSSPTAQTPSLSPSNNHHGEKPGGKRKYKSRHLDSDDKDPT
WRPSSSHCREKRRERGVKERRKKGRDGGRRRERQRRDVGESSSRRSREDRSPSVEIIYEG
TITSSMTQSPARKRRRKRHRNTQHSSSPVIITLDSDSSHDDANNKNNHSSSSSPLSSQQT
VDFSDLPPLPLVHSAGVGGALNAEIGELPVDILDRGSDGSETEPADQPEAAGPIAIDNSD
HDVDVENVEESGSLLGLDEDKGQMRTADTKLTAPGNQTGVGGVEGGSQPTGAIDAAATST
NLVRKRDAEVSTSDSHLLATILNDLKGITAPKCDLSLNFEPSCSPETRNKRFRKQCEVSQ
SRSNQDDWLAETRYPYTDSSDKRLSYDLVDENRGSDLPTCRTSIRPLPPLEQPKECRVRE
EGKDAPPLLKRASPVRSYNRNTPPPLKHKDHGSPHLSPISPIDLHSPCTSVGTDPVGVNS
HVDLNSNPTVSSVDSCLGAELPKDNPAIPGISALNQHVTNTMAQRGEPASTSSILADDMH
SSCHLALIDSHSTAPSKRGASAASIHSMSHKHPIDFHSSSGLENSSTSADCISHLGFSSF
HSSKVHSGRDSTKEISSSGHRSSPIDLQPVNSLSPIDFHLAKTGWFREKPAHTDSTSRSN
TMSSDSSRVAPVDPHPSSSVSAEGTPGGGDVFSGVNFNDTSLPVFVSSIDSRTQNLCSPI
DSHLSTLRENFSERRLPCRVSSVPTTATSGRLSPIDVHPSSPKFRVDLHSSTAASERLTD
SKATSIVNHGVRSPHGHLPPIDLHHTNPVPPGNAHSSVSVRAMMDEHLNHTALSSTTFHT
SHKKCSSQSQPTVESHSKLLNLTDSHSKPRNHFDSRSNPQISIDACPKHNLPIDSHPKNS
QRDFQLPTEYVITSSHQSVDNQWNSDASIDTHSDSKSPIDERSASSVWNTHTHSAT
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcacggtgcggacttcagcccggaggaggagaaaaaccccggatgagaagcga
cctggggagtctacttctgctgctcaggtgatggcgcccacacggatgaagctgcgagtg
cgtcgccgtgacaatgcggccgcaggtgccgcagcaggaggcggtcagccagaggaggaa
gaggagaggagccgagagagcagtggtcgcagcagcaggaggaaaaccaccacgtcaacc
acagctgctgccgcctcctcctcctcgtctcctcctccctcctcctcctctgcctcggcc
tcagcgcgggcagtgatggcggcggaggaggcatcgcctgattccaagtgtccgatctgc
ttggaccgcttcaacaacctggcgtacctggaccgctgcctgcaccgattctgcttcccc
tgcatccaggagtggtcgcacaacaaggctgagtgtccgctctgtaagcagcccttcgcc
tccatcctgcactccgtccgcgctgaggacgacttcaaggagtacacgctgcggccggcg
cccgccaacagcagcgtcgctgccactgtggcgatggtggcggcgatggcttcggcagcg
aggagcgaccaccagatgaggctgatgctgaggaggcacagagggccagacagcggggag
acaaacacgaggaggcggaggagggagaggggagggagaggcaggaggtcgggggtgtgg
gagtggtaccttgactctcctcctctggctctccctcctcttcctcaccatcccgctgtc
tctcccgttgtggcagaggacagtgaggagggagaggacctggaggagcagaggattagg
ggaggagctgatctggcggagcgtggcgtgatatttgaggggctgacgggactcggggga
gcggtggcacctgtgggccccaatgaccgggcatcacggcggctaatgacccgactggtg
gcgaggcagcggctgcagcgagaaggtggaactgtgcggcggctgagggagcgcgagaca
gtggccttccgccgtgctctctaccgaagcggcatacgggttcgtggcgttgccggaatc
aatggcaatggtaaccaggggcagcagcagcagcgtgacatcacagcagagagcttccgc
cgcaaccccacccacctgaacagactccgcccctggctgcggcgggagctcacggtgctg
tatggtgcacacggttcactcgtcgacatcgtccagcgcatcatcatggcacggcttgcc
cgccacggcctggaggacacgcccaccgtagaagaagagctgcgaccttttctgttggcc
cgcaccgaccactttctacatgaactggtcagcttcgcccgctcgccgctcagcctggaa
aactacgacctgcaggcggtgtacgagccaccggctgctgccttggagctggacggcacg
agcagctccagcgagagcagctcggtcatcgccatatcagagggcgaggaagaagagaga
caggtgggaggaagatcagaggagaggcagctggtgagggcggggggcgctcacgatgat
gtcatccaagcaggaagctgcctcagtctgtccgcctgggacgatgagactccaggaccc
tcgtactccaccgccgagccatcgtgttcgctcgcctcgctgtcttttagccctgcccca
caggaggcagccaatgaggaggaggccggggagaagcgggacgaggaggaggagtgtctg
atagtcggatacaagaagccaatagcggagcggactcctgagttggtgcagctctcctcc
gacaccgaggaagaggaggagaaaaagaaggaggaggagaacgcagctgagaaacctcct
tccctcccctccaccactcctcccctctcctacctacccacaatccccccctctacgtca
ggtgcctgcagccgcgagcaggatgaccagccaaaggagaaagatggcgaacaccgctca
catgcacgctcgtggtcgggcagctcgggaagaaactctgtgtgcactctcagcccggtg
acgcctggagagagcgagctgcgacgcgagagctggagagacaggaagtcctgcagcgag
gtgacgagggagaagaggaggaagaagaaaaggaggaggagagggcgggacaggagcggc
gaccggctcaggaagagcggcaccctgtacaacccaaaccgctccatttatcctgcgttg
atgcgtcaccactctccctcgccatttcactccagcattgagtcaggctcaccactgccg
cctagcccagacgactccagctgggagtacccatgttcccaggtttctcctctcacctcc
tccgtctcctcaccctcccgttccttctcctcctcacccctttgctcctccccacagccg
tcatcaccgacagcgcagacgccctcgctctcccccagcaacaatcaccatggagaaaaa
ccaggcgggaagaggaagtacaagagccgccacctggacagcgatgacaaggaccccacc
tggaggccgagcagcagccactgcagggagaagaggagggagcggggggtgaaggagagg
aggaagaaggggagagatggggggaggagaagagagaggcagaggagggatgtcggagag
agcagcagcaggaggagcagagaagaccggagtcccagcgtggagatcatttacgagggc
accatcacctccagcatgacacaatcccccgcacgcaaacgccgcaggaaacgacaccgc
aacacacaacatagcagctcgccggttatcatcaccctcgacagcgacagcagccatgac
gacgccaacaacaaaaacaaccacagcagcagcagcagtccgctcagcagccagcagacc
gtcgacttctcagaccttcctcctctcccgttggtgcattccgctggtgtgggcggagcc
ttgaatgcagaaattggtgagcttcctgttgacatcctggaccgagggtctgatgggtca
gagaccgagccagcggaccaaccggaggctgcaggtcccatcgccattgacaacagtgat
catgacgtggacgtggaaaacgttgaagagagtggttcactgctgggactggatgaggat
aaaggacaaatgagaacggctgatacaaagttaacagctcctggtaatcagacaggagta
ggaggtgtggagggcggctctcagccaacaggagcgatcgatgctgctgccacatcaaca
aatctggtccgcaaaagagacgctgaggtgtcgacctctgacagccatctgctagcaacc
atcctcaatgacctaaagggaatcactgcacctaaatgtgacctttctctgaactttgag
cccagctgttcacctgaaaccagaaacaagcgttttaggaaacagtgtgaggtcagtcag
tctcgctcaaaccaggacgactggttggctgagacaagatatccttatacagattcgtct
gacaagcgactgtcttatgatcttgtggacgaaaatcggggctctgacttgccgacatgt
cgtacctccatccgcccgctacctcctcttgagcaacctaaggagtgtagggtcagagag
gagggcaaggacgcccctccactcctgaaaagggcaagtcctgtgaggtcatacaacaga
aatactccaccgccattaaaacacaaagatcatggaagcccacacctgtcacccatatct
cccattgacttgcactcaccttgtacctctgttggcactgacccagttggtgtaaattct
catgttgatcttaattcaaatcctactgtctcctctgttgactcctgtttgggtgctgag
ctgcctaaagacaatccggccatccctggcatttcagcgctgaaccaacatgtcacaaac
actatggcacagagaggagagccggcatctacgagcagcattttagctgatgacatgcat
tcatcttgtcatctagcactcattgactcccattcaactgctccttctaaacgtggagca
tcagctgccagcatccattccatgagtcacaaacatcccattgatttccattcttcttct
gggttggaaaatagttccacaagtgctgactgcatttcacatctgggcttcagttctttt
cattcttcaaaggtacattccggtcgtgacagcacaaaggaaatatcttcctctggtcat
agatcttcacccattgacttgcagcctgtaaattctttatctcccattgatttccatttg
gccaaaactggctggttcagagagaaaccagctcacactgactctacctccaggagtaac
actatgagctcagattccagtcgggtagcacccgttgatccccatccttccagcagtgtt
tctgctgaagggacaccgggaggtggtgatgttttctcaggagtcaactttaatgacaca
tcactgcctgttttcgtttcatccattgattcaaggacacagaatctctgctcacccatt
gactctcacctgtccactttgagagagaacttttcagaaaggcgtctaccctgtagagtt
agctcagtgccaacaacagctaccagtggcaggttgtcacccattgacgtgcatcctagt
agtcccaaattcagagttgacctccactcttccactgcagcttcagaaagactgacggac
agcaaagcaacatcaatagtgaatcatggggtgagatcgccccatggtcacctgccaccc
attgatttgcatcatacaaatcctgtgccacctggtaatgcacattcttctgtctctgtc
cgcgccatgatggatgaacacttgaaccacacagccttatcctccactaccttccacaca
tcacataaaaagtgcagctcacagtcccaacctaccgttgaatcccactcaaaacttctc
aacctcaccgactctcattcaaaacctcgcaaccactttgattccagatccaacccacag
atctctattgacgcctgcccaaaacataacctccccattgactctcatccaaaaaactcc
cagagagactttcagctccccactgaatatgtcatcacatcttcccaccagtctgttgac
aaccaatggaactctgacgcctccattgacacccactcagactctaagtcgcccattgac
gaacgctcagccagcagcgtctggaatacacacacgcactctgccacgtag
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integrated database retrieval system
