Epinephelus lanceolatus (giant grouper): 117246048
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Entry
117246048 CDS
T07331
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117246048 (focad)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117246048 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
117246048
NCBI-ProteinID:
XP_033465601
LinkDB
All DBs
Position
20:10014301..10091040
Genome browser
AA seq
1807 aa
AA seq
DB search
MTESLKIRFDFPSPVIQAQALRNLVAAVLKEKGPNGQITQSSTQGSALEALWEQCCSDCA
LVRSVCCDAVVLLVDQGHADLQYVLNSVLNLLPSARNVQGLIKVIGRLLQMQADQRDRET
HFTCPYSIRSSPHPYITALENRVDCWPALLLEIDDFIQQAADRNEPAHITMLAPFLQFLY
CEPQRQPQYALLRHSLLRVLLPIRPGAGSVLQNKDQAQDSPVSDSLLHCLCQLVPHMQVD
SVEAVLELCGFVDTLLQGLVPACEERWRTERAGLLLQLLCACHRCLKLNGDCRPLLSLLQ
QLLHACQQELPLDELLMGVALLLLEVPAAQQTSLLNLALRLVPEQAELSPWLSPVLVLPV
LQLLSCSGLTEPLADQRSHNLNQDLAQSLLHRISRATDKPRQSAPPLALPLSSWYSELSV
ALSTLRKVADDPAAAADWLLSISSALSSSQSQICSLALIVTYLIITGQEDVCQLALNASQ
AIAAADPCQVPSLVPVLLFKLGKEKNPGVAHAVLNCLPNLGTHKLCVPMVLQTLHMLASA
PKLRAVAMRLMTALWKKQDRIYPELQRLLGQQDSRVVVGRDAQWEQIVARAACLRDICRE
RPYQHGGDMLAAITLTLNQCTKPDMATPASLALQGLQELCRAEVVDIVSTWRSLGPELSC
DSRPLMVKVIAELLALVPQLTVKSEEYEKLKEEVVSFLWNYAVSKDPEVASCGYRALADF
PETVHTINLLPEAARPATKDEDEEDEQGKEKEEEEKDLSIPGSSYVKLMALIPLSVLPAL
ELFLTSLVKQEMSQMPRGVYFSALRGGNLRSDQGKTMAGIPLFMLKTYENNKQPGLKPGL
AAGLLLCYELPVQTDRDGRPIDRFLISRSRSYQHTLAALIHEVNIQPSEWHRALFLPQAW
RGFMSRAFHAVLQGRRADLQMQQKQGKENPEELQYKQHCAWLWARDHLADAIKAARKDSP
VVQGNSILALSGLAAVLAKYESNLPADSDGSLMAGPEFVPTASWLAMVLNTLLSISSSSY
KARGQVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLVQVLSALQAGLP
GSPTADDSQAVQFHSGLALGMVLSSLHHQRLSDVSVEKDADLLLSSLDALQSCSFNPNLE
YNTGCVLGLGLVLAALCSSRQTDQHVHVTQTLDKLLSSLQDSSGLGRMQQEVLAYSVACV
GVSAFSGGLIDAAKAEEIMNTLRTLTEESQQTPGFSLALGLVVHGLSMSGHGKAEDIQPR
LLAAWIKILLAEGCPTMQRLAAFNGLVALVGSESYLIQQTSELELSSQQQSRLNEVIRAI
TQIITFSGAIGLQSNSACLVGHLHLAHMSTSHSHTAVPQDFSYLSERSVIRSIIDFITEA
GKKGPEYASPALVKTALTPLASVGASFQYPPINWSAVLSPLMRLSFGEDVQHQCVVLAAC
QAQSSQSASLFLGSWLSPPLVHSLSYHTRAHLYENLGLWMKHVAEDKLQVYMESLGLQQF
QEDLRPQRLSLCRSVLQGLAQAMALPNPPNNCWSVLCSTSDKIFTLLPNHIQDNEVDLYV
GITKCLSEMSDAEIDRITRVTETHMEKTCFVLAYLTSQGRVPLLGLNDVIAGVLRGWPSS
TVGWLLLQTFYQCRLATNPNTGVLKRMEWLLELMGHIRNIAFGATSVACGDTKLATDFLF
QIFSAAVVSWGDHFMPLLLGIRAQWFPWQPNSKPQTLQHSLYGEEAFTERALPQCLLGMP
HSLSLLLDKKPWSSQTDKFIDWLFSITEGPEQSLSASTISTAKAALLALKSSTEFKKKAV
WTRAYGW
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagtctgaagattcgttttgatttccccagccctgtcatacaagcacaggcg
ctgagaaatcttgttgctgctgtgctgaaggagaaagggccaaatggacaaatcacacag
tcctccacccagggttcagcattagaggctctgtgggagcagtgttgcagtgactgtgca
ctggtgcgttcagtctgctgcgatgccgtggtgctgctggtggatcaaggccacgcagac
ctgcaatatgtcctcaacagtgtcctcaacctcctgccctctgccaggaacgtccagggg
ctgataaaggtcattggacggctgctacagatgcaggcagaccagagagacagagagaca
cacttcacctgtccctactccatcaggagcagcccccacccatacatcaccgcgctggag
aaccgagtggactgctggccagctctgctgctggagattgatgacttcatccagcaggct
gctgacagaaatgaaccagcccacatcaccatgctggccccctttctgcaattcctctac
tgtgaacctcagaggcaaccccaatacgccctcctgcggcacagtctcctcagggtgctg
ctgcccatacgaccaggagctggatcagtcctccagaacaaggaccaggcgcaggactcc
ccagtgtctgacagcctgctacactgcctctgtcagctggtgccacacatgcaggtggac
agtgtggaggcagtgctggagctgtgtggatttgtagatacactgcttcagggtctggtc
ccagcctgtgaggagcgctggaggactgagagagccgggctgcttctgcagctgctttgt
gcctgccatcgctgcctcaagttaaatggagactgccgacctcttctcagcttattacag
cagctcctacatgcctgtcaacaggagctgccattggacgagctgctgatgggcgtggcc
ctgctcctgttagaggtccctgctgctcagcagaccagcctcctcaatctggcgctgaga
ttagtccctgagcaggctgagctgtcgccctggttgagtccagtcctggttcttcccgtg
ctgcaactcctgtcctgctcgggcctcaccgagccactggctgaccaacggtcacacaac
ctcaaccaggacttggcccagagcttgctccaccgcatcagcagagcgacagacaaaccc
cgacagtctgctccaccgctggcacttcctctcagctcctggtacagcgagctcagtgtg
gctctatccacgctgcgtaaagtggcagatgatccagcagcggcagccgattggctgctg
tctatcagctcggccctgtcgtccagccagagccaaatctgctccctcgccctcattgtg
acctatctcatcattacgggtcaggaagacgtctgccagctggctctgaatgcgagccag
gccatcgctgcagccgacccctgccaggtcccttcccttgttcctgtgctgctgttcaaa
ctggggaaggaaaagaatccaggcgtggctcacgctgtgctcaactgcctgccaaacctc
ggcactcataagctctgtgtccccatggtgctgcagactctgcacatgctggccagcgcc
cccaagctgagagcagtggcaatgcgcctcatgacagctctttggaagaaacaggatcga
atctacccagagctgcagcgtctgctgggacagcaggacagtagagtggtggtggggagg
gacgcccagtgggagcagattgtggccagggccgcctgtctccgggacatctgtagagag
aggccttaccagcatggaggcgacatgttggctgccattacgctcactctgaaccagtgc
accaaaccagacatggcaacccctgcttccctcgccctgcaaggactacaggagctgtgc
cgggcagaggtagtagacatcgtgtcaacatggagaagtctggggccggagctgagctgt
gactcccgtccactgatggtcaaagtcatagctgaacttctggctttggttccccagctc
actgtcaagtcagaggagtatgagaaactgaaagaggaggtggtcagcttcctgtggaat
tatgctgtgagcaaggatccagaggtggccagctgtggctacagagctttggcagatttt
cctgaaacagtccacacaataaatcttcttccggaggcggccagaccagctacaaaggat
gaggatgaggaggatgaacaagggaaggagaaagaggaagaagaaaaggatctctctatc
ccaggttcatcttatgtgaaactgatggctctcatccccctatctgttctaccagccttg
gagctcttcctgacctcactggtgaagcaggagatgagccagatgccacggggggtgtac
ttctctgccctgaggggggggaacctgcgttcagaccaggggaaaaccatggcgggaatt
ccattattcatgctgaagacctacgagaacaacaaacagcctgggctgaagccgggacta
gcagctggactgctcctctgttacgagctgcctgtgcagacggatcgtgacggcagacca
atcgatcgtttcctcatcagccgcagtcgcagctaccagcacaccctggcagccctcatt
catgaagtgaacattcagccatctgagtggcaccgcgctctcttcctgccgcaggcctgg
cgaggtttcatgagccgagctttccacgctgtcctacagggccgacgtgctgatttacag
atgcagcagaaacaaggcaaagagaacccagaggagctacagtacaaacaacactgtgcc
tggctttgggccagagatcacctggcagatgccatcaaggctgctagaaaggacagtcct
gttgttcaggggaactccatcctggctctgagcggcctggctgctgtcctggctaaatat
gagagcaacctgcctgctgacagtgacggcagccttatggcaggaccagaatttgtgccc
acagccagctggttggccatggttctcaacaccctgctcagcatcagcagcagcagctac
aaggcccgaggacaagttttcccatggttcctacatcgttcttactcaggtgagaacaca
gccagtgccatagctcgctcctgcgccagcctggccttgtccctgctcgtcccggtactg
gtggtgtggcagagggatggtctggtacaggtcctgtcagcgttgcaggctggcctgccg
ggttcccccactgctgacgactcccaggctgtccagttccactctggcctggcgcttggc
atggtgctgtccagcctgcaccaccaacgcctcagtgatgtctctgttgagaaggatgct
gatctccttctcagctctctggatgctctccaaagctgctctttcaaccccaacctggaa
tacaataccggctgtgtgttaggtctgggtctggtgctcgcagctctctgcagcagcaga
cagacagaccaacatgtccacgtcacccaaacactagacaaactactgtccagcctgcag
gacagcagtgggctgggacgcatgcagcaggaggtcttggcgtactctgtggcatgtgtg
ggtgtctcagccttcagcggaggccttatagatgctgccaaggctgaggagatcatgaac
actctgcgcaccctgactgaggagagccaacagacaccaggcttctccctggctctgggg
ttggtggtccatggcctgtcaatgtccggccatggtaaagcagaggacatccagcctcgt
ctgctggctgcttggatcaagatcttattggctgagggctgtcccactatgcagcgcctg
gctgcctttaacggcctggtggctttagtaggatctgagagttacctcattcagcaaaca
agtgagttggagctttcctcccagcagcagagcaggctgaatgaggttattcgagccatc
acacagatcataacattctcaggagccattggtctgcagtccaacagtgcttgtctggtt
ggtcatctgcatttggcccatatgtccaccagtcacagtcacacagcagttcctcaggat
ttcagttacctctcagagagaagtgtcatcagatccatcattgacttcatcacagaggca
ggaaaaaaaggtccagagtatgcctctccagctctggttaagactgctctgaccccactg
gcatcagttggagccagtttccagtacccacctatcaactggagcgcagtcctatctccc
ctgatgagactcagcttcggagaggatgtacagcatcagtgtgtggtgctggcagcgtgt
caagctcagtcttctcagagtgcctctctctttctgggctcctggctgtcacccccactt
gtgcacagtctcagttaccacactcgggctcacctgtatgagaacctgggcttgtggatg
aagcatgtagctgaagacaagctccaggtctacatggagagtctgggcctgcagcagttc
caggaggaccttcgaccccagcgtctgtccctgtgtcgctccgtactgcagggcctcgct
caggccatggctcttccaaacccccccaacaactgctggagcgtcctctgctccacctct
gataagatctttaccctcctgcccaatcacatccaggataatgaagtggatttgtatgtg
ggaatcaccaagtgtctgtctgagatgtctgacgcagagattgaccgaatcacacgagtc
acagagactcacatggagaagacctgctttgtcctggcttacttgacctcccagggcaga
gttcctctcttgggtctcaatgatgtaatcgctggtgtgcttcgcggttggccaagcagc
acagtcggctggctcctcctgcagactttttaccagtgtcgcctggccaccaaccccaat
acaggtgtgttgaaacgaatggagtggctccttgagttgatgggacacatccgaaacatt
gcctttggtgcaacctccgtcgcatgtggagacaccaaactggccacagacttcctgttc
cagattttttctgctgctgtagtttcctggggtgaccacttcatgcccctcctgcttggc
attagggcccagtggttcccatggcaacccaactctaagccccaaactctgcaacacagt
ctgtacggtgaggaggcattcactgagcgtgccctgccgcagtgcctgctgggaatgccc
cacagtctgagtctgctcctggacaaaaagccctggagcagccagacagacaagttcata
gactggcttttcagcatcacagaaggtcctgaacagagtctgtcggcctcgaccatcagc
acagccaaagctgccctgttggccctgaagtcctccactgagttcaagaagaaagctgtg
tggaccagagcatacggatggtag
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integrated database retrieval system