Epinephelus lanceolatus (giant grouper): 117246213
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Entry
117246213 CDS
T07331
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03015
mRNA surveillance pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117246213 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
117246213 (acin1b)
03015 mRNA surveillance pathway
117246213 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117246213 (acin1b)
03041 Spliceosome [BR:
ely03041
]
117246213 (acin1b)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117246213 (acin1b)
Spliceosome [BR:
ely03041
]
Complex C
Other components
EJC/TREX
117246213 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
117246213
NCBI-ProteinID:
XP_033465902
LinkDB
All DBs
Position
20:27536699..27566278
Genome browser
AA seq
1268 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLMKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAQQEEESDESPAVPEEDDDHSEDN
DSSSYVSDKMPCPIPPKPSMTRVEDRGGGDAMVAHGMMACGPDMGPGPTLHPQESLEAPG
ARMQRATFHQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVSRAQEKEGTAPSEPGS
AHSVLHLSRSAGASAGAQVHEDSDDDDDGDDESEDDDDWGPGPGGVRRGNRAPPQPQQMP
PSVPLTAARSKRKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPDLFPLPDTPKQSPPDTD
EQEGEGPEASRGPRVPFPLSSMQRQDSDSSSRSSSPEPPVKRRPGPLSLLVHKMESEGAF
RAAEATSAVDMLGETAHSTAACASSSESPLQRLERKRLQENREMEEERRLKEEKEREQQR
QDREKKKLQEQEREKKRLEEEKEKERKRLEEEEKQRQKEEQEKERKRQEQENEKERKRLE
EEKVKERKRLEEEKLKERKRQEEEKEKERKRQDEERRREEKQLKEKDKRQEAANKGRVAV
TEAQDSGSSSDSDSKSDSSSHSSQSSSSSSSSGVKTSPARQLKKADQGREAEDEKKTNLG
KGAEKRYLPKREVSEPSAAAVTEVEPDSESSVAQQPPSGAEPENSEGRLEESTTPKAFAA
RKISLTSSKTSPATTDGGAGEPETGTAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPD
IKVNQEAVVELHPEELQMSGDDESLDTNRGDQDKGLKIRRTVTQVVPGDSQENGQTNEEE
EEEKTEKEKRRRTSRDKRKNSVSEEASEAQTSVSVDGEAKKVTPSDSLVRRSISQQKSGV
SITIDDPVRTTRQPSPPHGKVSNIIHVTNLVRPFTLGQLKELLNRTGSVVEEGFWIDKIK
SHCYVTYATTEEAVATRAALHGVKWPQSNPKVLNVDFCEQEELDIHKGILKPDKEEDRAA
PQQPGGPQNRLPPLMPERDRDRERDRDRDRERERDRERDRGVAGVRDLWAEREREMQRRE
RARGEREWDRDKVREFARPGEDGQRSRSRDRERRRRERAKSKERKTDKKEKGDEPPAKLL
DDLFLKTKAAPCIYWLPLSEEQAAQRLLDRTERQKERERRRKEQREEEEKKREEEKKERL
KGREKDVSVTASSGAAGRGADGDRERGRGRDREGDRKRDDSHRPRRPSVGAGGGRRSLSR
SNPRDRRR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgtgttgcggat
ttgaaagccgccctggagcaaagaaacctcccgaagagcgggcagaaaaacacgctcatg
aagcgactgaaaggggctctgatgctggaaaatcttcagaagtcatcctcctctcacagt
gggctgcagcccaactcacagataggtgaggaaatgagccagaacagcttcataaaacag
tacctggctaaacagcaggagctccttcgtcagagactggaaagagaggcccagcaagag
gaagagtcagacgaaagcccagcagtgccggaggaggacgacgatcactcagaggacaat
gacagctcttcctatgtctctgacaagatgccttgccccatacctcccaaaccctccatg
accagggtggaggatagaggaggaggagatgcaatggtggctcatgggatgatggcatgc
ggccctgacatgggccccggtcccaccctccaccctcaagagtcccttgaggctccagga
gctcggatgcagcgagccacctttcaccaaggccacaaggagccaccagccccctctcct
ccccgcgccgtagcctccctgtcagtgcgcgtcctgggccagcctgaccgccaggggcta
ccccctgctgtgtcccgagctcaggagaaggagggcaccgcaccgagcgaaccaggatct
gcacattctgtcctccatctgagccgatctgctggggcctcagcgggagctcaggtccat
gaggacagtgatgacgatgacgacggtgatgatgagagcgaggatgacgatgattggggg
cctggtcctggcggggtacggaggggcaacagagcaccaccccagccacagcagatgcct
cccagtgtcccattaacagctgccagatccaaacgcaagctgcagcctccacagcacatc
ccgccaccacaggtacaccacacaccaatgcaactgcgccaccccactcctcctccttct
ccaccccctgacctgttccccctacctgacacacccaaacagagtccaccagacacagac
gagcaggagggcgagggccccgaggcatctcgtggcccgagggtgcctttcccactttcc
agtatgcagaggcaggactctgactcaagctctcgttccagcagtcccgagccccctgtg
aagcgcaggccggggcccctctctctgctcgtacacaagatggagtcagagggggctttc
cgtgcagcagaggccacctctgctgtggatatgttgggagagacggcacactccactgct
gcgtgtgccagttctagtgaatctcccctgcaaagactggagaggaagaggctgcaagag
aaccgagagatggaggaagaaaggcggctgaaggaggagaaagagagagaacaacagagg
caggatagagagaagaagaagcttcaagaacaggagagagagaaaaagcgcttggaggaa
gagaaggaaaaggagaggaaacgactggaagaggaggagaagcagcgtcagaaagaggag
caagaaaaagagagaaaacgccaggaacaggaaaacgaaaaggagagaaaacgcctggaa
gaagaaaaagtaaaagagagaaaacgcctggaagaagaaaaattaaaggagagaaaacgc
caggaagaggaaaaagagaaagagagaaaacgccaggatgaggagaggagacgagaggag
aaacagctgaaggagaaggacaagagacaggaggccgccaacaaaggcagggtggctgta
actgaggcccaagactcaggttcctcatcagactctgactccaaatcagactcctcttca
cactcatcacaatcttcctcctcctcctcctcctctggagttaaaaccagccctgcgagg
cagctgaagaaggcagaccaaggacgagaagcagaggatgagaaaaagactaacctgggt
aaaggggcagagaaacgataccttccaaaaagggaggtgtcggagcccagtgcagccgct
gtgacagaggtggaaccagactcggagagctccgtggcccagcagccgccctccggcgct
gagccagagaacagcgagggccgcctggaggagagcaccactcccaaggctttcgctgct
cgcaagatatccttgaccagcagcaagacgtctccagccaccacagatggaggagcaggt
gagcccgaaacaggaactgcagcagggaggaagaggcggtggggctccagcacagctgtc
actgctaagaaaccatccatcagcatcaccactgactcactgaagtcgttgatcccagac
atcaaagtgaaccaggaggcagtggtcgagctgcacccagaggagctgcaaatgtctgga
gacgacgagagcctggacaccaaccggggcgaccaggacaaaggcctcaagatccgacgt
accgtaacacaggttgtcccaggtgacagccaggaaaacggacaaacgaacgaagaggag
gaggaggagaaaacagagaaagaaaaacgacgcaggacttccagagacaaaaggaagaac
agtgtttctgaggaagcttcggaagcacagacatctgtcagcgttgatggagaggcaaag
aaagttacccctagcgacagtctggtgcgtcgctctataagccaacagaagtctggcgtg
tccatcaccatcgatgaccccgtccgcacaaccaggcagccctcgccacctcacggcaaa
gtctcaaacatcatccacgtgaccaacctggtgcgacccttcacccttggccaactcaaa
gagctgctgaacaggacgggcagcgtggtggaagagggcttctggatcgacaagatcaag
tctcactgctacgtcacgtacgctacgacagaggaggcggtcgccaccagagcagcactc
cacggggttaaatggcctcagagcaatcccaaggtcctcaacgtcgacttctgtgagcag
gaggagctggacattcacaaaggcatcctgaagccagacaaggaggaggaccgtgctgct
ccccagcagccaggtggtcctcagaaccggctgccccctctgatgccggagcgagacagg
gacagagaaagagaccgcgacagggacagggagcgagaacgagaccgggaacgggaccga
ggcgtggcaggagtgagggacctgtgggcggagcgggagagggagatgcagcggcgggaa
cgggcccgcggcgagcgggaatgggaccgggataaagtgcgggaattcgcgcgaccggga
gaggacggacagcggtctcgatccagagatagagagcggaggaggagggagagggccaag
agcaaggagaggaagacagacaagaaagagaaaggagatgagcctcctgctaaattacta
gacgacttgttcctgaagaccaaagcagctccgtgtatatactggcttcccctctctgag
gagcaggcggcgcagaggcttttggaccgcacagagcggcaaaaggagcgcgaacgaagg
cgcaaggagcagcgagaagaggaggaaaagaagcgggaggaggagaagaaagagaggctg
aagggtcgggagaaagacgtcagcgtgacggcgagcagcggagcagccgggcgaggagct
gacggagacagagagaggggccgcggccgagacagagaaggggacaggaagagggacgac
agccaccggcccagacgaccgtctgtaggtgctggcggtggccgccggtctcttagccgt
agcaaccccagggacagacgccgctga
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