Epinephelus lanceolatus (giant grouper): 117246226
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Entry
117246226 CDS
T07331
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117246226 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117246226 (dhx15)
03009 Ribosome biogenesis [BR:
ely03009
]
117246226 (dhx15)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117246226 (dhx15)
Spliceosome [BR:
ely03041
]
Complex A
U2 snRNP components
U2 related factors
117246226 (dhx15)
Complex B
117246226 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117246226 (dhx15)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
90S particles
Helicases
117246226 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_29
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
117246226
NCBI-ProteinID:
XP_033465926
LinkDB
All DBs
Position
20:16958509..16991549
Genome browser
AA seq
759 aa
AA seq
DB search
MLKRHRLDLGDAYSLDKRKPCDGRDRDRDRERDERSRDRDRDRDRDRDRDRDVKSSGVPT
ILTAGGGSFLKQTPFQQQINPFTNLPHTPRYYEILKKRLQLPVWEYRESFTDILMRNQSF
VLVGETGSGKTTQIPQWCVDMVRSVPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQE
VGYSIRFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVL
KEVVRQRADLKVIVMSATLDAGKFQVYFDHCPLLTIPGRTHPVEIFYTPEPERDYLEAAI
RTVIQIHMCEGDEGDILLFLTGQEEIDEACKRIKREVDDLGPDVGDIKIIPLYSTLPPQQ
QQRIFEPPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL
LVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKK
LGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI
ASCEFNCSNEVLSITAMLSVPQCFVRPTEAKKVADESKMRFAHIDGDHMTLLNVYHAFKQ
NHDSTQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFSSRDYYTNIRRALVTG
FFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPE
WLVKIAPQYYEMSNFPQCEAKRQLERIIAKISSKEYTQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcggcatcgtttagatttgggtgatgcttactcgctggataaaaggaaaccc
tgtgacgggcgtgaccgcgatagagacagagagcgtgatgaacggtcgagggacagggac
cgtgaccgggatcgagaccgtgacagggacagagatgtgaagtcatccggggtgcccacc
atcctaactgcaggcggtggaagcttcctcaagcaaaccccctttcagcagcagatcaac
cctttcaccaacctgccccacacaccacgttactatgagatcctgaagaagcggctgcag
ctgcctgtgtgggagtacagagagagcttcactgacatcctgatgcggaaccagtctttt
gtgctggtgggagaaacgggctctgggaaaaccacacagatccctcagtggtgtgtggac
atggtgcggtcagtgccgggaccaaagagagccgtggcctgcacccagcccaggagggta
gcagccatgagcgttgcccagagggttgctgatgaaatggatgtcatgctgggccaagag
gtgggctactccatcaggtttgaggactgcagctctgccaagacggtactcaagtacatg
acagatggaatgttgctgcgggaggccatgaatgatcccctgctcgagcgctacggtgtc
atcatcttggacgaggcacacgaacgcacattagccacagatatcctcatgggggtcctc
aaggaggtggtccgccagagggctgacctcaaggtcatcgtcatgagcgccacgctagat
gccggcaagttccaggtgtactttgaccactgcccgctgctcaccatccccggacgcacg
caccctgtggagattttttacacgcccgagcctgagcgggactacctggaagcagccatc
cgcaccgtgatccagatccacatgtgtgagggggacgagggggacattctgcttttcctc
actggacaagaggaaattgatgaagcttgcaagcgaatcaagcgggaggtcgacgacctg
gggcctgacgtcggcgatatcaagatcatcccactgtactccacacttcctccacagcaa
cagcagaggatctttgagccacccccacccaataaaccgagtggtgccattggaaggaag
gttgtcgtgtcaacaaacatcgctgagacatccctgaccattgacggcgtggtgtttgta
atcgatcctggatttgccaagcaaaaggtgtataacccacgaatcagagtggaatccctt
ttggtcacagccatcagtaaggcctcggcccagcagagggcaggtcgtgctggacgaaca
cgcccaggaaagtgcttccgcctttacacagagaaagcttacaagacagaaatgcaggac
aacacgtatccagagatcctgaggtccaatctgggctctgtggtgctgcagctgaagaaa
ctgggtattgacgacctggtgcactttgacttcatggacccaccagccccagagaccctg
atgagagccctggagttgctgaactacctggcagcgctcaatgacgacggtgacctgacg
gagctgggctccatgatggcagagttccccctggacccccagctggccaagatggtcatc
gccagctgtgaattcaactgctcgaacgaggtcctctccatcactgccatgttgtcagtc
ccacagtgcttcgtccgacccacggaggctaagaaggtggctgacgagtccaagatgcgc
tttgcccacatagacggggaccacatgacgctgcttaacgtctaccacgccttcaaacaa
aaccacgactccactcagtggtgctacgacaatttcgtcaactaccgctcactaatgtca
gcagacaacgtacggcaacagctgtccaggatcatggaccgcttcaacctgccacggcgg
agcaccgaattcagcagcagagactactacaccaacatccgccgagcgctggtcactggc
ttcttcatgcaggtcgctcacctggagcgcacaggccattacctgacagtgaaggacaac
caggtcgtacagctgcacccttccactgtgctggatcacaagccggagtgggtgctttac
aacgagtttgtgctcaccacaaagaattacatccgcacgtgcactgacatcaaaccagag
tggctggtgaaaattgccccgcagtactatgagatgagtaacttcccccagtgtgaagcg
aagagacagttggagcgtatcattgcaaaaatctcatccaaggaatacactcagtactaa
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