Epinephelus lanceolatus (giant grouper): 117246311
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Entry
117246311 CDS
T07331
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely02010
ABC transporters
ely04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117246311
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117246311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117246311
Transporters [BR:
ely02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117246311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
117246311
NCBI-ProteinID:
XP_033466062
LinkDB
All DBs
Position
20:19001490..19212083
Genome browser
AA seq
2236 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVELVWPLFLFFILVWVRSTNKPVYKGQCHYPNKA
MPSAGMLPWLQGMMCNINNPCLNYPTPGETPGQVNNFNNSVIAGMLIELQTLLVNRSILS
KAQLLADDLEQWDSALSQSNLDNAQPVILRNILRDNETFSTYLRANLSVPPEVVQSLMNA
EIKLNPMMGIPRPGNLKSILCEGTDLDEYVQFSSQAEKEAFQNVSCSRNPQQLINARRVL
LQNLDVRKVLSGVPTGLMDTATLLRKTTQDALPVIEEMARLRNSTNFKAASSLDFRKDMF
GSVNMLLCGEEPNASSHSDRLRANRKSESMGNSSDAFCQTLVDTLESTPGLRYIWSTFKP
LLQGKVLYTPDTPAVRLVVKEANSTFNALAMLKELADSWDELGPRVWDFLQNSPQVNALR
ALLANPVFAAALDQRLNGTGWTAELLANFLYNGPPEDRPPGMPAYDWRDAYNTTTEMLKL
LSNFLGCLDLNKFEAAPTESHLVSQALERLENDTYWAGVVFENLQPDSSHLPPYVKYKIR
MDIDEVERTNKLKERSWSPGARDNSFNDLRYIWGGFAYLQDMMDHGIIRVQTSKTQPLGV
FAQQMPYPCYVDDVFIQSIGGILPMFLVLAFMYTVCMTIKGLVLEKELRLKEVLRAVGIQ
NGALWGARFTENIVLLAVPCALISIMVKYGKVLQYSDPSVIFVFLLVFCLATITQCFFIS
VFFSKANLAAACGGLIYFVLYLPHTLCYAWRDVMGFRAKVVVSLLSCVAFGYGCENFAKY
EEQGIGIQWFNINSSPEEGERYTFLVSIFMLLFDAAFYWVLTWYIENVFPGQYGIPKPWY
FPFTVSYWCGTASVAHVDPGLLKDSTEPNEYLEKSPPDMKAGVSVRNLVKIYKTGKKLAV
DGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDILTDMDRIRKYLG
MCPQHNVLFSELTVEEHIYFYARLKGRTHDEVKIEMDQMIEDVGLPHKRKDLAKNLSGGM
QRKLSVAIAFVGGSKIVILDEPTAGVDPYARRSIWELLLKYKQGRTIILSTHHMDEADIL
GDRITIISHGKMRCCGSSLFLKKCFGSGYYLTLVREGTEKMTAQRNGIIHGQAKEEKDCP
SRSSSPDDGIGSQSWSNSDPSDLTALGQIVRRHVPEAVFLESIGQEITYILPYGGARDGT
FALLFQELDLAMADLGLTSYGISDTTLEEIFLKVAEETGVDAEIQTAKELLVRDCKGSSR
TSKRNSIASVHMKTEQASGMSELKGITNKVEDLKRNASVSGKGSTVITGWKLIRRQFLAL
FIKRFHHARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPNLELQPWMYDLPQTTFY
SNDGPDNAEVSKVVETLVNKPGFGTRCMIGDPIPNSPCSSSGSDWFTPSVDQSVADIFLN
GNWSMSNPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRIQNTTDTLLDLTGRNMSDFLVK
TFEHSGKTRYGGISVGAVNSQVRLTEAAIEASFKDLRVLFSSVQDNVTDQVFQNAETLLK
KLGTRDNVKVWFYNQAWHGMVSFLSVANNAILRGNLPAGQEPRRYGISVANHPLNLTKAQ
LSYVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPAVYWLAN
FAWDMCNYIIPCLIVITIFLCFQQKAYVSPPNLPALILLLVLYGWSITPMMYPASFIFSV
PSTAYVVLTCINLFIGINGSIATFVMELFDDDDNVTRINDIVKQVLLIFPHFCLGRGLID
MAKNQAMATLFSSFGEDRFEDPLSWDMVGKNLCAMSIQGVVMFAITVLIQYKFFFKPRLI
SGKSLSAEKEDIDVARERERVYGGNAQNDLLRICDLTKVYSRKSTPAVDRLCVGVPAAEC
FGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNMGYCPQFDALDELL
NGREHLEFYARLRGVPEKEVTMVAEWGIQKLGLVKYSSKSAGTYSGGNKRKLSTAIALIG
CPPVIFLDEPTTGMDPKARSFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNGR
FKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQQSFPGSVLKEKHHNTLQYQLP
YTQGALANIFSQFSSHQQRLGVEDYSVSQTTLDQVFVNFAKHQHGEEDSKAYDNAVDTSD
ELPLESVETSQESEKV
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctacggaagaga
caaaaggtgcggctggtcgtcgagttggtatggcctctgtttctcttcttcatactggtg
tgggtgcggtccaccaataagccagtttataaaggccaatgccactacccaaataaagcc
atgccatcggctggcatgctgccctggctgcaaggtatgatgtgtaacatcaacaatccc
tgtttgaactatccaacgccgggggagacaccaggccaagtcaacaacttcaacaactct
gtaattgctgggatgttgatagagctgcaaaccctcctggtgaacagatctattctcagc
aaggcacagttgctggcagatgacctcgaacagtgggactcagccctgtcacagtctaac
cttgataatgctcaaccagtgatcctgaggaatattctaagagacaatgagactttctcc
acgtatctgagagcaaatttgtcggtgccaccagaagtggtccaaagcctcatgaatgct
gagattaaactcaatccaatgatgggcatcccgaggccaggcaacctgaagagcatcctg
tgtgaggggacagatctggatgagtatgtccaatttagcagccaggctgaaaaggaggct
tttcaaaatgtcagctgctcccgcaatccacagcagctgattaacgcccggcgagtgctc
ctgcagaacctggacgtgaggaaagtgctttctggggtacctacaggtttgatggacaca
gccacactgttgaggaaaaccacccaagatgcattaccagtgattgaggagatggccagg
ttgcgaaactccacaaactttaaggctgctagttcactggatttccgaaaggacatgttt
ggcagtgtcaatatgctactgtgtggagaggaacctaacgccagttcacactcagataga
ctgagagcgaacaggaagtcagagtctatgggcaacagttctgatgctttttgtcagact
cttgtcgacaccctggagagcacacctggtctgcgctacatttggagcacattcaagccg
ttattgcaagggaaagtcctctacacacctgatacacccgctgttcgcctcgtggtgaaa
gaggcaaatagcacattcaatgccttggctatgctgaaagagctcgctgattcatgggat
gaacttgggccacgtgtctgggattttcttcaaaatagccctcaagtcaacgcattacgg
gctttgctggcaaatccagtgtttgctgctgccctcgaccagcgcctcaacggcacagga
tggacagccgagctgctggccaacttcctgtacaacgggcccccggaggatcggccgcct
ggcatgcctgcctacgactggcgggatgcttacaacaccacaaccgaaatgctgaagctt
ctctccaacttcctcggctgtttagacctgaataagttcgaggcagcccccactgaaagc
catctggtgagccaagcactggagcgtctggagaatgatacgtactgggccggtgttgtc
tttgaaaacctccagccagactccagccacctccctccctatgtcaaatacaaaattcgc
atggacatcgatgaggtggagcgtaccaacaaactcaaagagaggtcgtggtctcctggg
gcccgagacaactcctttaacgacctgcgctatatctggggaggcttcgcctacctgcag
gatatgatggaccatggcattatacgagtgcagacgtcaaagacccaaccactcggtgtt
tttgcccagcaaatgccatacccttgctacgtggatgacgtcttcatccagagtatcgga
ggcatcctccccatgttcctggtattggccttcatgtacaccgtgtgcatgaccatcaaa
ggccttgtgctggagaaggaactccggctcaaggaggtgctgcgtgctgttggcattcaa
aacggcgctctttggggcgcaaggttcacagagaacattgtcctgctcgcagttccctgt
gcgctcataagtatcatggttaagtacggcaaagtgctgcaatacagcgacccctcagtg
atctttgtcttcctgctggtgttctgcctggccaccatcactcagtgcttcttcattagc
gtcttcttctctaaggccaacttagcagcggcgtgcggcggcctcatctactttgtcctc
tacctgccgcacactctctgctacgcctggagggacgtcatgggtttccgggccaaggtt
gttgtgagtttattgtcgtgcgttgcctttggctacggctgtgagaactttgccaagtac
gaggagcaaggcatcggcattcagtggttcaacataaacagcagcccagaagagggagag
cgctacaccttcctcgtgtccatcttcatgctgctcttcgatgctgcgttttactgggtg
ctcacctggtacattgaaaatgtctttccaggccaatatggaatccctaagccatggtac
ttcccgttcactgtatcttactggtgtgggacagcctcggtggctcacgttgaccctggc
ttgctgaaggactcgactgaaccgaacgagtatctagagaaatcaccacccgatatgaaa
gcaggggtctcagtccgcaatcttgttaaaatctacaagactggaaagaagctggctgtg
gacggactgagtgtggacttctacgagaatcagatcacatctttccttggccacaatgga
gccggaaaaacaaccacaatgtcaattctgacaggactgtttccacctacatcaggaaca
gcactcatcaatggatacgacatcctcactgacatggaccgcatccgaaagtacttggga
atgtgcccacagcacaatgtgttattcagcgagctgacagttgaagagcatatctacttc
tacgctaggctgaaaggacgcacccacgatgaggtgaaaattgagatggaccagatgatt
gaggatgttggtttaccacacaagcggaaggatcttgctaagaacttgtcaggtgggatg
cagagaaagctgtctgtggccatcgcatttgttggaggctcaaaaatcgtcatcttagat
gaacctacagcaggagtggacccctatgcccgcaggagtatctgggaactgctgttaaaa
tacaaacaaggtcgcaccatcattttgtcaacacatcacatggatgaggcagacatctta
ggtgatcgcatcaccatcatatctcacggcaagatgcgttgctgtggctcctcactcttc
ctaaagaaatgttttggcagcggctactacctcactctggtccgagaggggactgaaaag
atgacagctcagcgtaatggcatcatacacggtcaggccaaagaggagaaagactgtcct
tcgaggagcagcagcccggatgatggcatcggcagccaaagctggagcaactctgatccc
tcagatttgacagctctgggtcaaattgtgcggcgccacgtccctgaggcagtcttcttg
gagagcatcggtcaggagatcacctacatactgccttatggtggagccagagatgggacc
tttgccctgctcttccaagagctcgacctggccatggctgaccttggcctgaccagctac
ggcatctctgacaccacgctagaggagatatttcttaaagtggcggaggaaaccggagtt
gatgcagaaatacaaacagcaaaggagctgttggtgagagactgcaaaggaagctcccgc
acatccaagcggaacagcatcgccagcgtccacatgaaaacagagcaagcctctggaatg
agtgaattaaaggggatcacgaataaagtggaagacttaaagaggaatgccagtgtcagc
gggaagggatccaccgtcatcaccggatggaagctgatcaggaggcagttcctggcgctc
tttatcaagcgcttccaccacgcccgaaggagccgcaagggactcattgcccaggtggtc
ctccctgctgtttttgtgtgcctgtctctgatcttctcactcatcgtcccgccattcact
gaatacccgaatctggagctgcaaccctggatgtatgatctgcctcaaaccaccttttac
agcaatgatgggccagataatgcggaggtatccaaggtggtggaaacgttggtgaacaag
ccaggctttgggactcgctgcatgattggagacccaataccgaactcaccatgttcttct
agcggctccgattggttcactccatcagtggatcagtccgtcgctgacatcttcctcaac
gggaactggagcatgtccaacccctccccctcctgtcagtgcagcacgcctaaacgaaca
atcatgttacctgactgtccgcctggtgcaggagggctccctccacctcagaggatccag
aacacaacagacacattgttggatttaactggacggaacatgtcggacttcctggtcaag
acttttgaacactcgggtaaaacaaggtacggaggcatctctgtcggggcagtcaactcc
caggtccgtctgaccgaggcagcaatcgaagcctcattcaaggatctaagagtcttattc
agttcagttcaggataatgtgactgatcaggtcttccagaatgctgagacgctgctgaag
aagctgggaacaagggacaacgtaaaggtgtggttctacaaccaggcatggcacggcatg
gtgtccttcctcagtgtggccaacaacgccatcctgaggggaaatctgccggcaggacag
gagccccgccggtacggcatctctgtggccaatcaccccctcaacctcaccaaggcgcag
ctctcctatgttgccatggccacaacctccactgacgtggtggtgtccatctgcgttatc
tttgccatgtccttcatccctgccagctttgtcctcttcctcatccaagagagggtgaac
aaagccaagcatctgcaatttgtcagtggagtaaacccagctgtctactggttggccaat
tttgcctgggacatgtgtaactacatcatcccatgcttgattgtgattacgatcttcctc
tgcttccaacaaaaagcctacgtttcacctcctaacctgcctgctttgattcttctgctt
gttctgtacgggtggtccatcacccctatgatgtatcccgcctccttcatcttcagcgtg
cccagcactgcctacgttgtgctgacctgcatcaacctcttcattggcattaacggcagc
atagccacctttgttatggagctctttgatgatgatgataatgtcacccgcatcaacgac
atagtgaagcaggtgctgctgatattcccacatttctgtctgggcagagggctaattgac
atggccaagaaccaggcgatggccaccctctttagcagttttggggaagaccgctttgag
gacccactcagctgggacatggtgggaaagaacctttgcgccatgtctatccagggagtt
gtcatgtttgccatcacagtcctcatccagtacaagttcttcttcaaaccacggcttatt
tcggggaagtcattatccgctgagaaagaggatatcgatgttgctcgggaacgcgagcgg
gtgtatggaggcaacgcccagaacgaccttctgaggatctgcgacctcactaaggtatac
tctcggaagagcacccctgctgtggacaggctatgtgtgggagtacctgccgcagagtgt
ttcggcttgctgggaatcaacggggctgggaaaaccaccacattcaagatgctgacagga
gacatcccagtctccggtggagaggccttcctaaatggatacagcatacgaacagaaatg
agggatgtgcaccagaacatgggctattgtccccagtttgacgctcttgatgaactgctg
aatggacgagagcatctggagttttacgccaggctacgaggggtaccagaaaaagaggtc
accatggtggccgagtgggggatccagaaactggggctggtcaaatactccagcaagtca
gcaggaacctatagcggtgggaacaaacgtaaactctctacagccatagccctgattgga
tgtcccccagtgattttcctggatgagccaaccactgggatggaccccaaagcccggagc
ttcctgtgggactgcatcctgagtgttatcaaagaaggacgctcagtcattctcacatca
cacagtatggaggagtgtgaagcactgtgcacacgcatggccatcatggtaaacggtcgc
ttcaagtgcctcgggagcatccagcatctgaagagcaggtttggtgatggctacacagtg
attgtgagggttggtggctctccccctgctctgaagccagtcgaggacttcgtccagcag
tcctttccaggcagcgtcctgaaggagaagcatcacaacacgctgcagtatcagctcccg
tacacacagggagctctggccaacatcttcagtcagttcagcagccatcagcagaggctg
ggcgtggaagactactctgtgtcccagaccacactggatcaggtctttgtgaactttgca
aagcaccagcatggagaggaggactctaaggcctatgacaacgctgtggacacctcagat
gagctgcctttggagtctgtcgagacttcccaagaatctgagaaggtgtaa
DBGET
integrated database retrieval system
