Epinephelus lanceolatus (giant grouper): 117246423
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Entry
117246423 CDS
T07331
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117246423 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117246423 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117246423 (pcdh7b)
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117246423 (pcdh7b)
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117246423 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Gp80
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
117246423
NCBI-ProteinID:
XP_033466184
LinkDB
All DBs
Position
20:29280501..29461011
Genome browser
AA seq
1255 aa
AA seq
DB search
MRTTGAVDYLYYCMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSFSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDENTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGQNAEMSLFIEEEEDIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGTGVISLVGKLEQKHYG
LHRLVIQVNDSGQPSQSTTTLVHVYVNETLSNSTVVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TTTPQQPKLSTFMSGNGSGSSSAEQPGSQETLAMAAMANGDPTAAHMMGDRNRNLLNKKM
ASSSSSYEAFGSPSYGSPGSGEEALGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactattgcatgctcatcctgcagcttgtg
catcagcccgctgccaagcaagtgctccggtaccgtttggccgaggagggacccgccgat
gtcagagtcgggaacgtagccggcgacctgggcatcgtcgccggctcaggcgaggtgaca
ttcacgctggagtcgggctctgattttttcaaaatagacaacatcacaggtgagctcacc
accaacgagaggcgcatagaccgtgaaaaattacagcagtgccaaatgatctttgatgag
aacgagtgctttatagattttgaagtgtcagtgattggaccggcccagagctgggtcgac
ctctttgaggggaaagtcatcatattagatataaacgataacaccccgtctttcccttcc
cctgtcctgacactgtctgtggaggaaaacagaccaattggaaccctttatctgctgccc
acagccacagacagagattttggcagaaatggaatagagagatacgagcttatccaggac
aatggggagaactcaaggcgcttgggctcttctggggattcattctctgggaagagaaga
tttgaggaaggcgcgagcaggagcagcgtctttgaactgcaagttgctgacactactgat
ggcgagaagcagcctcaactcatcattaaaggggcccttgatagggaacagagagactcc
tatgagctcacgctgcgtgtcagggatggaggagatccccctcgctcctcgcaggccatt
ctgagagtgatgatcactgacgtgaatgacaacaaccctcgctttgagaagagcgtgtat
gaagctgacctgccggagaacagctcccccggtgcccccatactgcagctcaaagcggct
gacgcagacgtgggggttaacggtcaaatagagtatgtgttcggtgcagccacggagtca
gtgaggaggctgctgaggttggatgagaacacagggtggctgagtgtgttgcaccgcatc
gaccgtgaagaagtgagccaactgaggttcacggtaatggcccgtgaccgaggccagccg
cccaaaatggacaaggccactgtggtgctgaacatcaaggatgagaacgacaacgtccct
gcgatagagatacggaaaattgggcgcattttcttgaaagatggcatcgccaacgtggct
gaggacgtggtggtggacacacccatcgccttggttcaggtgtcagaccgagaccagggg
gagaacggcattgtgacctgcactgttgtcggggatgttccctttcagctgaaaccagcc
agtgagatggagggtgagcagaataaaaagaaatacttcctgcacacgtctgcaccgctg
gactacgaggccacacaggaatacaatgtggtcatagtggctgtggactctgggagcccc
agcctcgcaagtaataactctcttatcgtcaaagtgggcgacactaacgacaaccctcct
atcttcagccagaatgtagtagaggtgtcgttccctgaaaacaatgctcctggcgagagg
gtgacaacagtggcggccatcgacgcagatagtgggaagaatgctgaaatcgcctactcc
ctggactcgtcggtaaatgggattttctctatcgatgcagacagtggagacatccgagta
aacaccattctggatagagagcaaacagagcgctacgaattcaaagtgatagccaaagat
aagggcataaacactctacagggctctgcgacagtggtcgtcctcgtggctgacaagaat
gacaacgagccaaagttcatgcaggatgtgttcaccttctacgtcaaagagaacctagaa
ccaaacagcccagtcggcatggtcacggtcatagacgcagataagggccaaaatgcagag
atgagcctttttattgaggaagaggaggatatcttttctattgagaacgacactgggact
attttctccaccctgtcgtttgacagagagcagaaaactacctacaccttccgtgtcaaa
gctgtggacggtggcgacccccccagatctgccaccgccacagtttcactctttgtcatg
gatgagaacgacaacgcacccactgtcactttcccaataaacagctcctacaccctcctc
cctccctccagcaacatcagaacagtagtcaggactgtcatagcaactgatacagacact
ggcatcaacgccgacttgaactacagcatcattggggggaaccccttcaagctgtttgag
attgacgggggcactggggtcatttcgctggtggggaagctggagcagaagcactacggc
ctccacaggctggtcatccaggtgaacgacagcggccagccttctcagagcaccaccacg
ctcgtgcacgtgtacgtcaacgagactctttccaactcaacagttgtggaggcccaggtg
gcaaagagcctgagcacgtccctgaacaccaacatcgccggcgaccccaactatgaccta
agcaaacagcggctgagcatcgtaatcggagtcgtttcaggcatcatgacggtcattctt
attattctagtcgtggtcatggctcgttattgccgccccaagaataagaacggctacgag
gccggcaagaaggaccacgaggacttcttcacgccacagcagcacgacaagtccaagaag
cccaagaaagacaagaagaaacagaagtccaaacagccgctctacagcagcatcgtcacc
gtggaggcctccaaacccaacgggcagcgctacgacggcgtcaacgagaagctctcggac
agccccggcatgggccgctaccgttcggtcaacggagggccggggagcccagatctggcc
cggcactacaagtccagctccccgctccccactgtccagcttcacccgcaatcgccgacg
gctgggaaaaagcaccaggcggttcaggacctgccccctgccaacacctttgttggcacc
ggagataacatttcccttggatctgaccactgctccgaatacagcagtcaaactatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctctgtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagcggcctggacgagtcggagacg
cccagcagcaagagttcgtcaggcccccggctgggcgcccttcccctgcctgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactcc
cggcccttgcctgacgtagccatgactggcaagtgcacccgggaatgcgacgagtatggc
cactcggactcctgctggatgcctgtgcgcacgtcgcctgagcggcggccatccaagtca
accaccaccccccaacaaccaaagctttccactttcatgagcggcaacggcagcggcagc
agcagcgccgagcagcccggcagccaagagaccctcgccatggccgccatggccaacgga
gaccccaccgccgctcacatgatgggcgaccgcaaccgcaacctgctcaacaagaagatg
gcttcctcctcctcctcctacgaggccttcggctcgccttcctacggctcgccgggaagc
ggggaggaggcgctgggccaccccaccgaggagatccctctggcgcccactggggagtac
aagcccacgtcctgtggtactctgacacggcgggaggtgtacctgtga
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