KEGG   Epinephelus lanceolatus (giant grouper): 117246423
Entry
117246423         CDS       T07331                                 
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
  KO
K16498  protocadherin delta 1
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    117246423 (pcdh7b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ely01009]
    117246423 (pcdh7b)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ely04515]
    117246423 (pcdh7b)
Protein phosphatases and associated proteins [BR:ely01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117246423 (pcdh7b)
Cell adhesion molecules [BR:ely04515]
 Cadherins
  Protocadherins
   117246423 (pcdh7b)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Mid2 TMEM154 LYRIC Gp80 Adeno_E3_CR2 DUF1180
Other DBs
NCBI-GeneID: 117246423
NCBI-ProteinID: XP_033466184
LinkDB
Position
20:29280501..29461011
AA seq 1255 aa
MRTTGAVDYLYYCMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSFSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDENTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGQNAEMSLFIEEEEDIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGTGVISLVGKLEQKHYG
LHRLVIQVNDSGQPSQSTTTLVHVYVNETLSNSTVVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TTTPQQPKLSTFMSGNGSGSSSAEQPGSQETLAMAAMANGDPTAAHMMGDRNRNLLNKKM
ASSSSSYEAFGSPSYGSPGSGEEALGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq 3768 nt   +upstreamnt  +downstreamnt
atgaggactactggtgcagtggactatttgtactattgcatgctcatcctgcagcttgtg
catcagcccgctgccaagcaagtgctccggtaccgtttggccgaggagggacccgccgat
gtcagagtcgggaacgtagccggcgacctgggcatcgtcgccggctcaggcgaggtgaca
ttcacgctggagtcgggctctgattttttcaaaatagacaacatcacaggtgagctcacc
accaacgagaggcgcatagaccgtgaaaaattacagcagtgccaaatgatctttgatgag
aacgagtgctttatagattttgaagtgtcagtgattggaccggcccagagctgggtcgac
ctctttgaggggaaagtcatcatattagatataaacgataacaccccgtctttcccttcc
cctgtcctgacactgtctgtggaggaaaacagaccaattggaaccctttatctgctgccc
acagccacagacagagattttggcagaaatggaatagagagatacgagcttatccaggac
aatggggagaactcaaggcgcttgggctcttctggggattcattctctgggaagagaaga
tttgaggaaggcgcgagcaggagcagcgtctttgaactgcaagttgctgacactactgat
ggcgagaagcagcctcaactcatcattaaaggggcccttgatagggaacagagagactcc
tatgagctcacgctgcgtgtcagggatggaggagatccccctcgctcctcgcaggccatt
ctgagagtgatgatcactgacgtgaatgacaacaaccctcgctttgagaagagcgtgtat
gaagctgacctgccggagaacagctcccccggtgcccccatactgcagctcaaagcggct
gacgcagacgtgggggttaacggtcaaatagagtatgtgttcggtgcagccacggagtca
gtgaggaggctgctgaggttggatgagaacacagggtggctgagtgtgttgcaccgcatc
gaccgtgaagaagtgagccaactgaggttcacggtaatggcccgtgaccgaggccagccg
cccaaaatggacaaggccactgtggtgctgaacatcaaggatgagaacgacaacgtccct
gcgatagagatacggaaaattgggcgcattttcttgaaagatggcatcgccaacgtggct
gaggacgtggtggtggacacacccatcgccttggttcaggtgtcagaccgagaccagggg
gagaacggcattgtgacctgcactgttgtcggggatgttccctttcagctgaaaccagcc
agtgagatggagggtgagcagaataaaaagaaatacttcctgcacacgtctgcaccgctg
gactacgaggccacacaggaatacaatgtggtcatagtggctgtggactctgggagcccc
agcctcgcaagtaataactctcttatcgtcaaagtgggcgacactaacgacaaccctcct
atcttcagccagaatgtagtagaggtgtcgttccctgaaaacaatgctcctggcgagagg
gtgacaacagtggcggccatcgacgcagatagtgggaagaatgctgaaatcgcctactcc
ctggactcgtcggtaaatgggattttctctatcgatgcagacagtggagacatccgagta
aacaccattctggatagagagcaaacagagcgctacgaattcaaagtgatagccaaagat
aagggcataaacactctacagggctctgcgacagtggtcgtcctcgtggctgacaagaat
gacaacgagccaaagttcatgcaggatgtgttcaccttctacgtcaaagagaacctagaa
ccaaacagcccagtcggcatggtcacggtcatagacgcagataagggccaaaatgcagag
atgagcctttttattgaggaagaggaggatatcttttctattgagaacgacactgggact
attttctccaccctgtcgtttgacagagagcagaaaactacctacaccttccgtgtcaaa
gctgtggacggtggcgacccccccagatctgccaccgccacagtttcactctttgtcatg
gatgagaacgacaacgcacccactgtcactttcccaataaacagctcctacaccctcctc
cctccctccagcaacatcagaacagtagtcaggactgtcatagcaactgatacagacact
ggcatcaacgccgacttgaactacagcatcattggggggaaccccttcaagctgtttgag
attgacgggggcactggggtcatttcgctggtggggaagctggagcagaagcactacggc
ctccacaggctggtcatccaggtgaacgacagcggccagccttctcagagcaccaccacg
ctcgtgcacgtgtacgtcaacgagactctttccaactcaacagttgtggaggcccaggtg
gcaaagagcctgagcacgtccctgaacaccaacatcgccggcgaccccaactatgaccta
agcaaacagcggctgagcatcgtaatcggagtcgtttcaggcatcatgacggtcattctt
attattctagtcgtggtcatggctcgttattgccgccccaagaataagaacggctacgag
gccggcaagaaggaccacgaggacttcttcacgccacagcagcacgacaagtccaagaag
cccaagaaagacaagaagaaacagaagtccaaacagccgctctacagcagcatcgtcacc
gtggaggcctccaaacccaacgggcagcgctacgacggcgtcaacgagaagctctcggac
agccccggcatgggccgctaccgttcggtcaacggagggccggggagcccagatctggcc
cggcactacaagtccagctccccgctccccactgtccagcttcacccgcaatcgccgacg
gctgggaaaaagcaccaggcggttcaggacctgccccctgccaacacctttgttggcacc
ggagataacatttcccttggatctgaccactgctccgaatacagcagtcaaactatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctctgtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagcggcctggacgagtcggagacg
cccagcagcaagagttcgtcaggcccccggctgggcgcccttcccctgcctgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactcc
cggcccttgcctgacgtagccatgactggcaagtgcacccgggaatgcgacgagtatggc
cactcggactcctgctggatgcctgtgcgcacgtcgcctgagcggcggccatccaagtca
accaccaccccccaacaaccaaagctttccactttcatgagcggcaacggcagcggcagc
agcagcgccgagcagcccggcagccaagagaccctcgccatggccgccatggccaacgga
gaccccaccgccgctcacatgatgggcgaccgcaaccgcaacctgctcaacaagaagatg
gcttcctcctcctcctcctacgaggccttcggctcgccttcctacggctcgccgggaagc
ggggaggaggcgctgggccaccccaccgaggagatccctctggcgcccactggggagtac
aagcccacgtcctgtggtactctgacacggcgggaggtgtacctgtga

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