Epinephelus lanceolatus (giant grouper): 117246632
Help
Entry
117246632 CDS
T07331
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117246632 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ely03400
]
117246632 (msh2)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117246632 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
117246632
NCBI-ProteinID:
XP_033466389
LinkDB
All DBs
Position
21:complement(27449735..27460683)
Genome browser
AA seq
935 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVKDLLLMRQYRVEVYKNHGKSSKEHDWKIEYKA
SPGNLTQFEEILFGGGTGAVGCAGVVAVRFATGGDGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEGSTDGSKLREVVERGGVLVSDRKRAEFSSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPALITAL
ERYSGSYQVLLEAAFLSPLQDLNTDFLKYQEMIDTTLDMNQIDHHEFLVKASFDPVLSEL
REKMDTLEKSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKNLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTRNREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ
LDAVVSFATASVSAPVPFVRPQLLADGCRRMELQQARHPCMETDADTAFIPNDITFVQGE
KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAALSVIDSILARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGSFCLFA
THFHELTALAAQQPTVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPAGDKSEQEEEPEAKRRRTDKQVGEKLIQDFLEKAKSLPAATMSE
EEVKAALRRMKEELVAKNNMYITDILSHCVPVKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacagaacctgtccatggacagtgcagccgagcatggcttcctc
aacttcattttctccatgccggagaaaccagacactactttcaggatattcgaccgtaac
gactactacaccgttcacggaaaagacgccatcttcgctgcgaaggaggttttcaagacg
aacggggtcatcaaatatttgggctcaggcagtcgcaagctggagagcgtggtcctgagc
aagctgaactttgaggcctttgtgaaggacttgctgctgatgaggcagtacagagtggag
gtgtacaagaaccacggcaagagcagcaaggagcacgactggaagatcgagtacaaggcc
tctccaggaaacttgactcagtttgaggagatcttgttcggcggtggaaccggtgcagtg
ggttgtgcaggagtcgtagccgtgcggttcgccacaggaggtgatggacagcgggtggtc
ggcgtcggctacgtggacgcggcccagaggacgatgggagtgtgcgagtttccggacaac
gaaatcttctccaacttggagtccctccttgtccagatcagccccaaagagtgtctcctg
gcccagggcgaaggcagcactgacggcagtaaactacgagaggtggtggagcgtggtggc
gtgctggtctctgacaggaagagagcagagtttagcagcaaggacatggtccaggatctc
aacaggctgctgagggccaagagaggagagactgtggcgagcaacacgctgcctgagctg
gacaaacaggtggccatgtcgtgcttggctgcagtggtgcgattccttgagctgctctct
gacgagtccaacttcaactcctttagtctgaccactctggacctgggtcagtacatgagg
ctggacaacgctgccgtgagggctcttaacctcttccagggatcacccgacgacaccagt
ggagctcactcattggccggtctgttgaacaagtgccgcacaccgcagggtcagcggctg
gtcaaccagtggatcaaacaaccactcatggacaaaaccaaaatagaagaaaggctggac
ctggtggagagcttcgtgtgcgactctgagctcaggcagacctgtcaggaggatttactg
cggcggtttcctgatcttcaccgcctggccaagaagttccaccgtcactctgcgacgctg
caggactgctaccgcgtctaccaggctgtgagccagatccctgcactcatcacggccctg
gagagatactcaggtagctaccaggttctgttggaggcagcgttcctctctcctctccaa
gacctgaacactgacttcctgaagtaccaggagatgattgacaccacgctggacatgaac
cagatcgaccaccatgagttcctggtgaaggcgtcgttcgatccggtgctgagtgagctc
agagagaagatggacacgctggagaagagcatgcaggcggtgctcaacagcgcagcgagg
gaactaggtctggacgccggaaagacggtgaagctggagtcaaatgccatgctgggtttt
tacctgagagtcacctgcaaagaggagaagaacctgaggaacaacaagaaattcaccacg
ctggacgtgcagaagaacggagtgcgcttcacaaacagtaagctgagctctctgaacgag
gagtacaccaggaacagggaggagtacgaggaggctcagaatgccattgtcaaagagatc
atcaacatcgcctcaggttacgtggatcccctccagacgctgagcgacgtgatagcgcag
ctggacgcggtggtgagtttcgccacggcgtccgtctcggctcccgtgccgttcgttcgg
ccccagctgttggcagacggctgcaggcgtatggagctgcagcaggccagacacccctgc
atggagacggacgcagacaccgccttcatacccaatgacatcaccttcgtccagggggag
aagaacttctatattattacaggaccaaatatgggtggcaagtcgacattcatccgtcaa
gtgggtgtgatcgctctgatggcccagatcggctgctttgtcccatgcgagaaggcggcg
cttagtgtgattgacagcatcctggccagggtgggagcgggagacagccaggtaaaagga
gtgtccacctttatgtcggagatgctggagacggctgccatcctgcgctcggccacggag
aactcgctcatcataatcgacgagctcggcagaggcacgtccacgtacgacggcttcggc
ctggcctgggccatcagcgagcacatcgcctccaaaattggctccttctgtctgtttgcc
acccacttccacgagctgacggcgctggcagcgcagcagcccaccgtccacaacctgcac
gtcacagccctgacctcccacaacacactcaccatgctgtacagagtcaaaccaggtgtg
tgtgaccagagttttggaatccacgttgccgagttggcttgcttcccgccatcggtggtt
gccatggctaaggagaaggcggaggagctggaggagttccaggaacctgcgggggataag
tcggagcaggaggaagagcctgaggccaagagacgacggacagacaaacaagtgggggag
aaactgatccaagacttcctggagaaggcgaagtcgctccctgctgccaccatgagtgaa
gaggaggtgaaggcggcgctcaggagaatgaaggaggagctcgtcgccaaaaataacatg
tatatcacggacatcctttcacactgtgtcccagtaaaaacagcttaa
DBGET
integrated database retrieval system