KEGG   Epinephelus lanceolatus (giant grouper): 117246632
Entry
117246632         CDS       T07331                                 
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    117246632 (msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ely03400]
    117246632 (msh2)
DNA repair and recombination proteins [BR:ely03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     117246632 (msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II AAA_27
Other DBs
NCBI-GeneID: 117246632
NCBI-ProteinID: XP_033466389
LinkDB
Position
21:complement(27449735..27460683)
AA seq 935 aa
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVKDLLLMRQYRVEVYKNHGKSSKEHDWKIEYKA
SPGNLTQFEEILFGGGTGAVGCAGVVAVRFATGGDGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEGSTDGSKLREVVERGGVLVSDRKRAEFSSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPALITAL
ERYSGSYQVLLEAAFLSPLQDLNTDFLKYQEMIDTTLDMNQIDHHEFLVKASFDPVLSEL
REKMDTLEKSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKNLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTRNREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ
LDAVVSFATASVSAPVPFVRPQLLADGCRRMELQQARHPCMETDADTAFIPNDITFVQGE
KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAALSVIDSILARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGSFCLFA
THFHELTALAAQQPTVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPAGDKSEQEEEPEAKRRRTDKQVGEKLIQDFLEKAKSLPAATMSE
EEVKAALRRMKEELVAKNNMYITDILSHCVPVKTA
NT seq 2808 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaacagaacctgtccatggacagtgcagccgagcatggcttcctc
aacttcattttctccatgccggagaaaccagacactactttcaggatattcgaccgtaac
gactactacaccgttcacggaaaagacgccatcttcgctgcgaaggaggttttcaagacg
aacggggtcatcaaatatttgggctcaggcagtcgcaagctggagagcgtggtcctgagc
aagctgaactttgaggcctttgtgaaggacttgctgctgatgaggcagtacagagtggag
gtgtacaagaaccacggcaagagcagcaaggagcacgactggaagatcgagtacaaggcc
tctccaggaaacttgactcagtttgaggagatcttgttcggcggtggaaccggtgcagtg
ggttgtgcaggagtcgtagccgtgcggttcgccacaggaggtgatggacagcgggtggtc
ggcgtcggctacgtggacgcggcccagaggacgatgggagtgtgcgagtttccggacaac
gaaatcttctccaacttggagtccctccttgtccagatcagccccaaagagtgtctcctg
gcccagggcgaaggcagcactgacggcagtaaactacgagaggtggtggagcgtggtggc
gtgctggtctctgacaggaagagagcagagtttagcagcaaggacatggtccaggatctc
aacaggctgctgagggccaagagaggagagactgtggcgagcaacacgctgcctgagctg
gacaaacaggtggccatgtcgtgcttggctgcagtggtgcgattccttgagctgctctct
gacgagtccaacttcaactcctttagtctgaccactctggacctgggtcagtacatgagg
ctggacaacgctgccgtgagggctcttaacctcttccagggatcacccgacgacaccagt
ggagctcactcattggccggtctgttgaacaagtgccgcacaccgcagggtcagcggctg
gtcaaccagtggatcaaacaaccactcatggacaaaaccaaaatagaagaaaggctggac
ctggtggagagcttcgtgtgcgactctgagctcaggcagacctgtcaggaggatttactg
cggcggtttcctgatcttcaccgcctggccaagaagttccaccgtcactctgcgacgctg
caggactgctaccgcgtctaccaggctgtgagccagatccctgcactcatcacggccctg
gagagatactcaggtagctaccaggttctgttggaggcagcgttcctctctcctctccaa
gacctgaacactgacttcctgaagtaccaggagatgattgacaccacgctggacatgaac
cagatcgaccaccatgagttcctggtgaaggcgtcgttcgatccggtgctgagtgagctc
agagagaagatggacacgctggagaagagcatgcaggcggtgctcaacagcgcagcgagg
gaactaggtctggacgccggaaagacggtgaagctggagtcaaatgccatgctgggtttt
tacctgagagtcacctgcaaagaggagaagaacctgaggaacaacaagaaattcaccacg
ctggacgtgcagaagaacggagtgcgcttcacaaacagtaagctgagctctctgaacgag
gagtacaccaggaacagggaggagtacgaggaggctcagaatgccattgtcaaagagatc
atcaacatcgcctcaggttacgtggatcccctccagacgctgagcgacgtgatagcgcag
ctggacgcggtggtgagtttcgccacggcgtccgtctcggctcccgtgccgttcgttcgg
ccccagctgttggcagacggctgcaggcgtatggagctgcagcaggccagacacccctgc
atggagacggacgcagacaccgccttcatacccaatgacatcaccttcgtccagggggag
aagaacttctatattattacaggaccaaatatgggtggcaagtcgacattcatccgtcaa
gtgggtgtgatcgctctgatggcccagatcggctgctttgtcccatgcgagaaggcggcg
cttagtgtgattgacagcatcctggccagggtgggagcgggagacagccaggtaaaagga
gtgtccacctttatgtcggagatgctggagacggctgccatcctgcgctcggccacggag
aactcgctcatcataatcgacgagctcggcagaggcacgtccacgtacgacggcttcggc
ctggcctgggccatcagcgagcacatcgcctccaaaattggctccttctgtctgtttgcc
acccacttccacgagctgacggcgctggcagcgcagcagcccaccgtccacaacctgcac
gtcacagccctgacctcccacaacacactcaccatgctgtacagagtcaaaccaggtgtg
tgtgaccagagttttggaatccacgttgccgagttggcttgcttcccgccatcggtggtt
gccatggctaaggagaaggcggaggagctggaggagttccaggaacctgcgggggataag
tcggagcaggaggaagagcctgaggccaagagacgacggacagacaaacaagtgggggag
aaactgatccaagacttcctggagaaggcgaagtcgctccctgctgccaccatgagtgaa
gaggaggtgaaggcggcgctcaggagaatgaaggaggagctcgtcgccaaaaataacatg
tatatcacggacatcctttcacactgtgtcccagtaaaaacagcttaa

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