Epinephelus lanceolatus (giant grouper): 117246898
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Entry
117246898 CDS
T07331
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ely03016
]
117246898 (trub1)
Enzymes [BR:
ely01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
117246898 (trub1)
Transfer RNA biogenesis [BR:
ely03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117246898 (trub1)
Prokaryotic type
117246898 (trub1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
117246898
NCBI-ProteinID:
XP_033466807
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Position
21:complement(4088691..4097732)
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AA seq
278 aa
AA seq
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MAGNISNTAAPITSSLSKLQSLNGTFAIYKKQGPTSADVLNKLKEVLLKEAGVKNPNPRK
RKKQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLAGSKKYIAVGQLGKATDTLDATG
SVILEKDFGHITRLDIEEKLKAFTGDIMQVPPLYSALKKDGQRLSVLLMKGHKVEAKPAR
PVTVYNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLE
EHALHEEQWTLEHILRSLQPCSQSEQGGHCAEPLEVDT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaacatcagcaacactgcagctccgataactagctctctatctaaactacag
tctttaaatggaacgttcgcgatatataaaaaacaagggccgacatctgcagacgtgtta
aataaactcaaagaagttttactcaaagaggctggtgtaaaaaacccaaacccgcgaaag
aggaagaagcagagcctgaagatgggacacggagggacactggacagtgctgccagcggg
gtgttggttgttggtgttggaaatggcacaaagatgctcagtacaatgttggctggttct
aagaaatatattgctgtggggcaactggggaaagcaacagatactctcgatgccactggc
agtgtgattctggagaaagactttggacacataaccaggttagacattgaggagaaactg
aaagctttcactggtgacatcatgcaagttcctccactctactctgcactaaagaaagat
ggccagcgtctatctgtcttgctgatgaaaggtcacaaggtcgaggccaaaccagctaga
ccagtcactgtgtacaacctgaccctgcaagaattcaaacctcctctcttcactctggat
atagagtgtggtggtggattttatgtcagaagcttggtggatgacctgggaaaagctctg
tcgtcctgtgctcatgtgaaggaactgacccgaaccaagcagggtcagttcaccctggag
gagcacgccttacatgaggagcagtggacactggaacacatcctgcgctctctgcagccc
tgctcacaatcagagcagggtggccactgcgcagagccactagaggttgacacctga
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