Epinephelus lanceolatus (giant grouper): 117246907
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Entry
117246907 CDS
T07331
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03420
Nucleotide excision repair
ely03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117246907 (ercc4)
03460 Fanconi anemia pathway
117246907 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ely03032
]
117246907 (ercc4)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117246907 (ercc4)
DNA replication proteins [BR:
ely03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117246907 (ercc4)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117246907 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
117246907
NCBI-ProteinID:
XP_033466825
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Position
21:14552557..14560056
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AA seq
899 aa
AA seq
DB search
MAGPLLEFETEMFLSLFGSDGLLVVAEGMGIDRILLQFMRVYSEQDSLVLLLNTTTPEQE
YFTEQLRAEGVTHLPRTVTSDVNSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNSALDSHKPEVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKIFGSNSGWLFLDSSTSMFMNARVRVYRYPESKKKLKVGAEAEKQKSSSASEL
KRELVLEKSPKWEALTEVLQEIEKENKSPQHEPGRVLICASDDRTCAQLQQYIRHGSDWM
LNRLYARTIGKSDSAAAAAAAFELDTQKKGNGWPKKGAKGKEPAQKKKPTKSKKRPSLTL
TQMMGKEETGEAAVMGSSGDEDELMGEDGEEEEQLQLDLSSDAYYGVLKEPLTVIHPLKG
LTDPHSLTRVLHEVEPSFVVLYDAEISFVRQLEIYKASRPGKMLRVYFLIYGGSTEEQKY
LTALSKEKKAFEHLIREKATMVIPEEREGRQDTNLDLARNLDPANATTNTCNAGGQEQPK
EPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSVSDLIGSLQSG
RLYTQCLSMTRYYRKPVLLIEFDPAKPFSLMARSDFRHEISSNDISSKLTLLTLHFPRLR
ILWCPSPHATAELFLELKKGRLEPDAAAAQAVTAESDTVAESADLYNPGPYDFLLKMPGV
NTKNCRALIKSADSLADLAKFSQETLAEILENATNAKLLYEFLHNVADVSAPVQKAKQT
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccgctgctggagtttgagactgagatgtttctgagtctgttcggtagtgac
gggctgctggtcgtggcggaggggatggggatagaccgcatcctgctgcagttcatgcgg
gtctactcggagcaggacagcctggtccttctgctcaacaccaccacacctgaacaggag
tatttcacagagcagttgcgagcggagggtgtgacccatctgcccaggacagtgaccagt
gacgtcaatagcacggagcgctataatgtttacactgagggaggagtgctgtttgtcacc
agccggatcctggtggtcgacttcctcactgatcgcatccctgctcacctcatatcaggc
atcctggtgtatcgtgcccataaaatcatcgagtcgtgtcaggaggccttcatcctccgc
ctgttcagacagaagaacaagaccggcttcattaaagccttcaccgacaaggccacgtcc
ttctcctctggtttctgccaggtggagcgtgtgatgaggaacctctttgtcaagaagctc
tacctgtggcccaggtttcaagcatcagtaaactcagcgctggacagtcacaagccagag
gttgtggagctccatgtttcattgacgccggctatgagggccatccagagctccatactg
gacataatgagcgcctgtctgaaggagctgaagcgctacaaccccaccctggaggcagag
gacctctccctggagaacacgttaggcaacgcttttgaaaagaccatccgtcactatctg
gaccctttgtggcaccagctgggagcaaagaccaaggccctggtccaggacctgaaagtg
ctgagggttctcctgctctacctcacccagtacgactgtgtcaccttcctcaatctgctg
gagtcgctgcgctctagccaaaagatcttcggatccaactcagggtggttgttcctcgac
tccagcacctccatgttcatgaatgccagagttcgagtgtaccgctaccctgagagcaag
aagaaactcaaagtgggagcagaggcagagaaacagaagtcctcctctgcttcagagttg
aagcgggagctggtgttggagaagagcccaaagtgggaggctctgactgaggtactgcag
gagattgagaaggagaacaagagccctcagcatgaaccaggtcgtgtgctaatctgtgcc
agtgatgacaggacgtgtgcccagctgcagcagtacatcaggcacggctctgactggatg
cttaaccgactttatgcccgcacaattggtaaaagtgactctgcggcagctgcagctgct
gcctttgaactcgacacacagaagaagggcaacggctggcctaaaaaaggagccaagggg
aaggagcctgcacagaaaaaaaagcccacaaagagtaaaaaaaggccctccctgaccctg
acccagatgatggggaaagaggagacaggtgaagcagccgtgatgggcagcagtggagat
gaggatgaactgatgggggaggatggagaggaggaagaacagctgcagctggatttgtca
tcagatgcctactatggtgtcctgaaggagcctctgactgttattcacccacttaaaggc
ctcactgacccacacagcttgacgcgagtgctgcatgaggtggagcccagctttgtggtg
ctgtacgacgctgaaatcagttttgtccgccagctggagatctacaaagctagccggccc
ggaaagatgctgagggtgtatttccttatctatggaggctcgacggaagaacagaagtac
ctgacggcgctgtcgaaggaaaagaaagcctttgaacatctgatcagggaaaaggcaact
atggttatcccagaagagagggaggggcgacaagacactaatttggaccttgctagaaac
ttagaccccgccaatgccaccaccaacacctgcaatgcaggaggccaggagcagcccaaa
gagccctcacgagtcattgtggacatgcgggagttccgcagtgaactgccttccctgctg
caccgtcgtgggctggacattgagcccgtcaccctggaagtaggtgactacatcctcacc
ccggacacatgtgtggagcgcaagagtgtcagcgatctgatcggctcattgcagagcggc
cgcctctacacccagtgtctctccatgacgcgctactacagaaaaccagtgcttctcatc
gagtttgacccagcgaaaccattttccttaatggcccgatcggatttccgtcatgaaata
tcgtccaacgacatttcttcaaaactcaccttactcaccttgcatttccctcggctccgt
atactctggtgcccgtccccacacgccacagctgagctcttcctggaactgaagaaaggt
cgcctcgagcccgacgccgcagcagctcaggcagtcacagccgagtcagacacagtggct
gaatcggcagacctctacaaccccggaccttatgacttcctattgaaaatgcctggggtc
aatacgaaaaactgtagggcacttataaaaagtgcagacagcctggcagatttagccaaa
ttcagccaggagacgctggcagaaatactcgagaatgctaccaacgctaagctgctgtat
gagtttctgcataatgtcgccgacgtctctgctcctgtgcagaaggccaaacagacatga
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