Epinephelus lanceolatus (giant grouper): 117246948
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Entry
117246948 CDS
T07331
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ely01002
]
117246948 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117246948 (usp42)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117246948 (usp42)
Peptidases and inhibitors [BR:
ely01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117246948 (usp42)
Ubiquitin system [BR:
ely04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117246948 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117246948
NCBI-ProteinID:
XP_033466880
LinkDB
All DBs
Position
21:15912868..15923145
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AA seq
1214 aa
AA seq
DB search
MTIVDKSSENSDHESVGCKRSPFTSGDVGMDGSCSSSWAMGPTMPSDSPRLKPAGGCLGP
TPGAAVYNSTPSSVDPPKDQVISSGDGMDLPQKVLFPPERLNLKWTQVHRVGAGLQNMGN
TCFLNSALQCLTYTPPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGHLR
SRVKCLNCKAVSDTFDPFLDIPLEIKTATSVSKALEQFVKPEQLDGENSYKCTKCKKMVT
ASKRFTIHRNSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGEPQIYGLYAV
LVHSGFSCHAGHYFCYVKASNGQWYQMNDSSVTVSDIRSVLSQQAYVLFYIKSADVKKAG
DYSHMSQYPGIPGQSSPRPVVIPRNNNTIHHNNIGFIGPQLPPHMTKSTLHVNGNGSLRD
YPSNSKPSTSSSVVGKPSHGLGSSSSSISHSISRPTMIPDHDKRQKLSFFIGQGKQNRPS
SSSSSYSQPSSASGSSSSSSSSSSLSSSQSTSDVRFVPRQLNHVNGTSCSNGGHHTGGNG
AAFLVPYSQESSEESDQENCGTLDNGCLAKSHLNGNNRTGEAFDNSPQAPNGESGVHHNG
NGVNGPTNGVSKTSQNGHHHYGHHKVNGHNTPDKTSSSNHGSSSSVATVAANGLDSDHHQ
TSKEAHTSASSQASSSQSIPPDATESQHLSTPDTRATNVSKPQSQYPAFFTLSSPPSATA
TKTHSVTSRESASSSAQHGNHAALSTPSNCSQSTNGASAAPQRVSRGEGEAKDPPQSSDP
SAGTEGHTDAKEQHQFKPSSRGNEGQHSRYRERDRQYSDWSRDRERHYRDRSQERESDGD
RYRYRRDYRDYHHRYRDRLPPRDRSYRDWEPERRWERIPHHPREADRDRCSNHYHYHRSR
EDSGRERRGYGYPYRTESHSRGKWQQESRESRPMKDKSNGREKGYYLSKEETSLPATERE
TSTKSKGSPPRPHLSTFESAPNREDQDHKRSADHQSKEREDSSEGRHSKKHKKSKKKKKS
KDKDRHRESGSSEVDSDRATETKKKKKKKKRQRESEAEQHSPGAARSHKNRSSEERESRK
RRYHDIKDGKHDNGFSPEKRRRTDCTEGSSDHLVPSRHTSPTNGSTHGHLNGYTGNGYSQ
TNGDSYGFSSRLKH
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaatcttcagaaaattctgaccacgagtcagtcgggtgtaagcgc
tctcccttcaccagtggagacgtggggatggacggcagctgttccagcagctgggcaatg
ggccccaccatgcccagcgattctcccaggctgaagcctgcaggaggctgcctgggtcca
acacctggagctgcggtttacaacagtacaccatcctctgtggacccgccgaaggaccaa
gtgataagcagcggtgatggcatggacttgccccagaaggtcctcttccctccagagcgg
ctcaacctaaagtggacccaggttcaccgagttggtgcaggcctgcagaacatggggaac
acctgcttcctcaactcagctctgcagtgtctcacctacacccctccattcgccaactac
atgctgacacgggaacactccaaaacgtgtcacgagccagggttctgtatgatgtgcacc
atgcaaaaccacatcattcaggtttttgcaaactctgggaacgtcattaagcccattggt
gtgctcaatgaactcaaaaggattgctaagcacttccgctatggaagccaggaggatgct
catgagttcctgcggtacacagtggatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcaaacgcaggcaaccactttcatccaccaagtatttggcgggcacctaaga
tccagagttaaatgtttaaactgcaaagcagtgtccgatacatttgacccttttctggat
attcctctggaaattaagacagcgaccagtgtctccaaggctctggagcagtttgtcaaa
ccggagcagctggatggtgaaaactcatacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagatttaccatccaccgcaattccaacgtgcttaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaaattacaaaggatgtgaaatatccagagtacctggac
ttgcggcccttcatgtctcagtctcaaggggagccccagatctatgggctctatgctgtg
ttggtccactctggattcagctgtcatgctggacactacttttgctacgttaaggcaagc
aatggtcagtggtatcagatgaatgactcctctgtgactgtcagtgacatcaggtctgtt
ctcagccagcaggcttacgtccttttctacatcaagtccgctgatgtaaagaaagcaggg
gactacagtcacatgagtcagtatccaggcatccctggtcagtcgtctccacgaccggtg
gtgataccacgtaacaacaacaccatccaccacaacaacattggcttcataggtccccag
ctgccaccacacatgaccaagagcactctccatgtcaatgggaatggatctctgagggac
tatcccagcaactccaagcccagcaccagcagtagtgttgttggaaaacctagccacgga
ctgggctcctcctcatcttccatctcccactcaatcagccggcccacaatgatcccagac
cacgacaaacgccagaaactttcatttttcatcggacaaggcaaacagaaccgcccgtcc
tcctcctcgtcctcttacagccagccgtcctctgccagcggtagcagcagctcctcctcc
tcctccagctctctatcctcctcacagtctacctcagacgttcgctttgttccacgtcag
cttaaccacgttaacggcacgtcttgcagtaatgggggtcaccacacaggaggcaatgga
gcagcgttcttggtgccgtacagccaagagtcctcagaggagtcagaccaggagaactgt
ggcactctggataacggctgtttagcaaagtctcaccttaatggaaacaacagaacagga
gaggcctttgataattctccacaagcccccaatggagagtcaggggtgcaccacaatggt
aacggagtaaacggaccaaccaatggtgtttctaaaaccagtcaaaatggacaccaccat
tatggacaccacaaagtgaatggacacaacacccctgataaaacctctagcagtaaccat
ggcagttcatcctctgtggctactgttgctgctaatgggctcgacagtgaccatcatcaa
acaagtaaagaggcacatacttctgcctcatcccaggccagttcgtctcagagcatccct
cctgatgccactgaaagccagcacctctcaactcctgacacaagggctacaaatgtgtct
aaaccccagtctcagtatcctgcatttttcactcttagctctccaccttcagctacagct
acaaagactcattctgtcacatctcgagaatctgcttcttcttctgcccagcatggcaac
catgcggccttatctaccccgtcaaactgctcccaaagcaccaatggggcttccgcagct
ccacagagggttagcagaggtgagggtgaagcaaaggatccaccacagagtagtgatcca
tcagcagggactgaaggacacacagatgctaaagagcaacaccagtttaagcccagctct
agaggcaatgaaggacaacattcccgatacagggagagagacagacaatactctgactgg
agcagagacagggagagacattacagggacaggagtcaggagcgagagagtgacggtgat
cgttaccggtacagacgggactacagagattaccatcatcgctacagggatcgcttgcct
cctcgtgatcgttcctacagagactgggagcctgagcgtcgctgggagcggatcccacac
cacccgagggaggctgatcgcgacaggtgctctaaccattaccactaccaccgctcaaga
gaggactctggacgtgagcggaggggatacggttatccctaccgcactgagtctcatagt
cgcgggaagtggcagcaggagagtcgagaatcccgaccgatgaaggacaagagcaacggc
agggagaagggctattatctgtcgaaagaggagacttccttgcctgccacagagcgagaa
acctcaacaaagtcaaagggctcgccccctagacctcatctctcaacatttgaatcagct
ccaaacagggaagatcaggatcacaagaggtctgccgatcatcagagcaaagagagggag
gacagctctgagggccgccactctaaaaaacacaaaaagagcaagaaaaagaaaaagtca
aaggataaagacagacaccgtgagagcgggagctccgaggttgattcagacagagccaca
gaaacaaaaaagaaaaagaagaaaaagaagagacagcgggagagcgaggctgagcagcac
agcccaggagcagctcggagccacaagaacagaagtagtgaggagagggagagccgcaag
cgccgttaccatgacatcaaggacggcaaacatgacaatggtttttcgccagaaaaacgt
cggcgcacagactgcactgagggcagcagtgaccatctagttccctcccgtcacacctca
cccacaaacggttcaactcacggccatctcaacggatacacaggaaacggttacagccaa
accaatggtgactcctacggattctccagtcgcttgaaacactga
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