Epinephelus lanceolatus (giant grouper): 117247049
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Entry
117247049 CDS
T07331
Symbol
trim8b
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8b
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117247049 (trim8b)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117247049 (trim8b)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117247049 (trim8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_10
RING_XB3-XBAT31
RT_RNaseH_2
DUF3287
TRIM_CC
U-box
DUF3584
DUF16
Motif
Other DBs
NCBI-GeneID:
117247049
NCBI-ProteinID:
XP_033467063
LinkDB
All DBs
Position
21:complement(28734493..28747029)
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AA seq
595 aa
AA seq
DB search
MPARTMMASDMAETWRNCFEEELICPICLHVFSDPIQLPCKHNFCRGCISEAWAKDSSLA
RCPECNHAYTQKPSLEKNHKLSNIVEKYNALSVEKATTPALQCILCRRGPPLPAVKVCLR
CNAPCCQSHVQTHLQQPCSALGHLLVEAEAVKAWTCLQHDEYRLYHCEAEQTAVCQYCCF
ARCHPSHGHAVTDVELRRNDIRQSLLRQQERVEERVQEIEEQLCKLDSDKCVVEDRVCEL
KEEVRLQYQRMHQLLEEDLGRTLEALDRAQARFCQENAAQVLALGEQRHEAQKLLSSIHT
AFSKAEELSFMKNTKPVKILTDRSQACVGSSLPPYKVGNLNSKLFLSEISKREKSLKRTL
EAPLTPPSTFLQSVPAYPSGQSSGSGAEKRKHSTAFPEGNGNVGKNAAPGFKDSSSSSSS
SSSSSLAKQPYLGSSSASGEGQSTNQQPLGPCGPPHISESGGTGSGSGSLTNHHSGSVFG
SSHFPPGGSSSSHSSQQAVLPQYGGRKILVCTMDNCYCSGVPSVSGHRSHPPYPRSGSFP
WVSAQDYPPPPGLASGGPSMQGLAVRDWIDASQTHRHADFYGLYGQPSTKHYVTS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccgcaccatgatggcctctgacatggctgagacgtggaggaactgttttgag
gaggagctcatctgccccatctgcctgcacgtgttctcagatcccatccagctgccctgc
aagcacaacttctgccggggctgcatcagcgaggcctgggccaaagactcctcactggcc
cgctgccctgagtgcaatcatgcttacacgcagaagcccagcctggagaagaaccacaaa
ctgtccaacatagtcgagaagtacaacgccctgagcgtggagaaggccaccacgccggcg
ctgcagtgcatcctgtgccgccgaggcccgccactccctgcagtgaaggtctgcctgcgc
tgcaacgccccgtgctgccagtcccacgtccagacacacctgcagcagccctgctcagcc
ctcgggcacctgttggtggaggcggaggcagtgaaggcctggacctgcctgcagcacgac
gagtacaggctgtaccactgcgaggccgagcagacagcggtatgtcagtactgctgcttc
gcccgctgccaccccagccacggccacgccgtcactgacgtggagctgcgacgcaacgac
atcagacaaagcctgttacgacagcaggagcgcgtggaggagcgagtgcaggagatcgaa
gaacagctctgcaaactcgactctgacaagtgtgtggtggaggacagggtgtgtgagctg
aaagaggaggtgcgtctgcagtaccagcgcatgcaccagctcctggaggaggatctcggt
cggacactggaggctctggaccgggctcaggctcggttctgccaggagaacgctgcccag
gttctagctctgggcgagcagcgccacgaggcccagaagctgctgagctccatccacacg
gccttcagtaaggcggaggagctgagcttcatgaaaaacaccaagccggttaaaatcctc
acagacaggtctcaggcatgtgtgggcagcagtctccctccttacaaagtggggaattta
aactctaaactgttcctctcagaaatctcaaaaagagagaagagcttgaagagaacgctg
gaagctcccctcacccctccatcgaccttcctgcagtctgtccctgcgtatcccagcggt
cagagctccggctctggagcagagaaacggaaacattccactgccttcccagagggaaac
gggaacgtcggaaaaaacgccgctcctggtttcaaggactcctcctcctcctcttcctcg
tcttcttcctcatcgctagccaagcagccctacctgggctccagctctgcctccggagaa
ggtcagtccaccaatcagcagcctctcggcccctgcggcccgcctcacatcagcgagagc
ggcgggacgggaagcggaagcggctctctgaccaaccaccattcaggctccgtgttcggc
tcctcgcactttcctcctggaggcagcagctcctcgcactcctcccagcaggctgtgctg
cctcaatacggtggccgtaagatcctggtgtgcacaatggataactgctactgctccgga
gtgccctcggtgtcgggccaccgcagccatcccccgtacccgcgctctggctctttcccc
tgggtcagcgcccaagactacccccctcctcccggcctggcctctggaggtccatccatg
cagggcttggcagtgagggactggatagacgcctcgcagacacacagacatgcagatttt
tacgggctgtacgggcagccttctacaaagcactacgtcaccagttaa
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