Epinephelus lanceolatus (giant grouper): 117247074
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Entry
117247074 CDS
T07331
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04514
Cell adhesion molecules
ely04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117247074 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117247074 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117247074 (cdh5)
04090 CD molecules [BR:
ely04090
]
117247074 (cdh5)
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Major cadherins
117247074 (cdh5)
CD molecules [BR:
ely04090
]
Proteins
117247074 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
Fibulin_C
InlK_D3
Motif
Other DBs
NCBI-GeneID:
117247074
NCBI-ProteinID:
XP_033467121
LinkDB
All DBs
Position
2:complement(51065393..51115969)
Genome browser
AA seq
731 aa
AA seq
DB search
MMAWLQLWSTGLTAIMALSFSLAATEDLGLPAMAAQQRGPVEIVKKENHPVLFRQKREWI
WNSLYVEEEKPAPIAYKIGQLKSSQKVEVKSFRIEGEGANTIFTVDRKGDLFVTRSLDRE
EKNAYHLTARMYDGNNQLIEDSGDFVVQVTDINDNTPVFPRPYNGSIMERSMIGTKVVEV
RATDADDPTTANGELRYSLTPGGDLSAFEIDSISGVISCKTNTLDRETKGQYIVVVKAQD
MRGMASGSTSTTSVTITITDINDNIASFTRKTYELHVREDHKLNEKIGTLELEDRDQIQN
KEPIFVIPSENSKVFNTELSPNKDGNLMLKQALDYETTPSYSFTIQVKENLRNLRFPADN
VNSAVTSAQVIIKVLDVDEAPVFSQPIYTFNVVEERVVTNIGAVTARDPDKANKSIRYSI
LDKDCPISINPLTGQLSTLRTLDRELEATHMFQVKAQEEPNGLESFVKVNIIVQDINDNK
PELTVDEIFVCENDPTNTVIGTLRATDKDDQPASFTFSLASESSNFSIRDYGNSTADVMV
KQGPFSLDDPKDYSVDVRISDGGRPIQTSITKLAIKSCRCDARRIPTQCKAGARRMGVSV
HALIAILLCILTILVIVILFVMRKRYQKDSLASMKNSGEIHEQLVTYDEEGGGEMDTNGY
DVSILTSACNDGSLLRHPEHHPHPSLYAMVQKSQHHAQPTACKGDMAVMIEVKKDEADHD
RDGFPYDTLHI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttggctccagctgtggagtacggggcttacggccattatggccttgtccttc
tctcttgctgctactgaagatttgggcctccctgcgatggcagcacagcagcgaggccct
gtcgagattgtgaagaaggagaaccatcccgtcctgttcaggcagaagagagagtggatc
tggaattctctgtatgtggaagaggagaaacctgcacctatcgcctacaagatcggacag
ctgaagtcaagccagaaagtggaggtgaagagcttcagaatagagggtgaaggagcaaac
accatcttcaccgtagatcgcaaaggagacctgtttgttaccagatctctggacagagag
gagaagaatgcgtaccatttgaccgccaggatgtatgatgggaacaaccagctgatagag
gactctggagactttgtcgtccaggtgacggatatcaatgacaacactccagttttcccc
agaccatataatggatccataatggagagatccatgataggaactaaagtagttgaggtg
agggcgactgatgctgatgaccccaccactgctaatggagagctcaggtactctttgacc
ccaggcggagacctttctgcctttgaaatcgacagcatctcaggtgtgatcagctgcaag
acaaacactctggaccgggaaaccaagggtcagtacatagtggtggttaaagctcaggac
atgagaggaatggcctctggcagcacatccaccacctccgtcaccatcaccatcaccgac
atcaacgacaacatagcttctttcacccgaaagacgtatgaactgcacgttcgtgaggac
cacaagttgaatgagaagattggcactctggagttggaggacagggatcagatccagaac
aaagagcccatcttcgtcattccaagtgaaaacagcaaagtgtttaacactgaactcagc
cccaacaaggatggcaacctcatgctcaagcaggctctggactacgagacgacccccagc
tacagtttcaccatccaagtgaaagaaaacctgagaaacctgcgctttcctgccgacaac
gtgaacagcgccgtcacctcagctcaggtaatcatcaaggtgctggatgtagacgaggca
ccggttttctcgcagcccatttacactttcaatgtggtggaggaacgagttgtgaccaac
atcggagcagtcactgccagagatcctgacaaagccaacaagagcatacggtactccatc
ttagacaaggactgtccgatcagtatcaacccgctcacaggtcagctgtccaccctgagg
acgctggacagagagctggaggccacacacatgtttcaagttaaggcacaggaggagcca
aatggtttggagtcatttgttaaagttaacattatagttcaggacatcaacgacaacaag
cctgaactgaccgtggatgagatcttcgtatgtgagaacgaccccacgaacacggtgata
ggaaccttgagagccacagataaagacgaccagccggcctccttcactttcagcctggcc
agcgagagctccaacttctccatcagagactacggcaacagcacagcagacgtcatggtg
aaacaggggccgttcagcctggatgaccccaaggattacagcgtggatgtgcgcatcagt
gacggagggcgacccatccagaccagcatcaccaaactggctatcaagtcgtgtcgctgt
gacgccaggcggattcctacgcagtgcaaagctggtgctcggaggatgggagtgagcgtc
cacgccctgatagccattctgctctgcatactgaccatactggtcatagtgatcctgttt
gtgatgaggaaacgctaccagaaggattcactggccagtatgaagaacagcggtgagatt
catgagcagcttgtcacatacgatgaggagggaggaggagagatggacactaacggctac
gacgtctcaatcctcacttccgcttgcaacgacggctccctgctccgtcatcctgaacac
cacccccacccctctctctacgccatggtgcagaaatcccaacaccacgcacaacccact
gcatgtaagggcgatatggctgtgatgatcgaggtgaagaaagacgaggcggaccacgac
agagacggcttcccatacgacactctccacatctaa
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