Epinephelus lanceolatus (giant grouper): 117247183
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Entry
117247183 CDS
T07331
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117247183 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117247183 (gspt1)
03012 Translation factors [BR:
ely03012
]
117247183 (gspt1)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117247183 (gspt1)
Translation factors [BR:
ely03012
]
Eukaryotic type
Release factors
117247183 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117247183
NCBI-ProteinID:
XP_033467405
LinkDB
All DBs
Position
21:14160190..14176468
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAELPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPASDGAPDPVASMEVAETAAPVENGGTDADMTTEEETWEQKEEPGGGGGGGGQEDLGSG
GACEEGAARNEDEEMMMEEEEEEMPMPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
PECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLV
MMPNRHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgccgcggcggagctccccaccgccttcgccgccctcaacgtcaacgccaagccgttt
gtccccaacgttaatgccccggtgtttgtaccgagcttccttcaagccagcgccgtggaa
atgccggcctcagacggtgcccctgacccagtggccagcatggaggtggcagaaacagct
gctccggtggagaatggaggcacagatgcagacatgaccacagaggaagagacgtgggag
cagaaggaggagccagggggaggaggaggaggcggaggacaggaggacctgggctcagga
ggagcctgtgaggagggcgctgcgaggaatgaggatgaggagatgatgatggaggaggaa
gaagaggagatgcccatgcctaaagtggctccggcaccaccagatgcccccaagaaagaa
catgtgaacgtggtctttatcggtcacgtggatgctggtaaatcaactattggaggacag
atcatgtacttaactggaatggtggacaagcgaaccctggaaaaatatgaaagagaagca
aaagaaaaaaatagggagacatggtacctgtcgtgggctctggacacaaaccaggaggag
agagacaagggaaagacggtggaggtcgggagggcttactttgaaactgagaaaaaacac
ttcaccatcctggacgcccccggacacaagagctttgttcccaacatgattggtggagct
tcacaagccgacctggcagtcctggtaatttcagcgaggaagggtgagtttgagaccggc
tttgagaagggtggacagacgcgggaacacgccatgctggctaaaacagcaggagtcaag
catctcattgtcctggtcaacaagatggatgaccccaccgtcaactggagcctagaaagg
tatgaagagtgtaaggagaagctggttccatttctaaagaaagtgggcttcaaccccaag
aaggacatccactttatgccttgctccggactcacaggtgccaacctcaaggaccccgtg
cccgagtgcccctggtacacgggtctgccatttattgcccatctggacagtttgccaaac
ttcaccagatccagcgatggaccagtcagactacctattgtcgacaagtacaaggacatg
ggcacagttatcctcgggaagctggagtctggatccatcagtaaagcccagcagttggtc
atgatgccgaacaggcacacagtggaggtattgagcttgctgagcgacgatgtggagaca
gacgatgcaagtcctggggagaacctgaagttgaggctgaagggcatcgaggaggaagaa
atcctccccggttttatcctctgtagccctgacaacctctgccactccggccgcaccttt
gacgcacagatcgtcatcattgagcacaaatcaatcatttgtcctggttacaatgcagtc
cttcacatccacacctgcattgaagaagtgcaaatctcagccttaatctgtctggtggac
aagaagacgggggagaaaagcaaaacacgaccacgctttgttaagcaggaccaggtgtgt
atcgccaggctccgggcagctggagtcatctgcttagagaccttcaaagacttccctcag
atgggacgattcacactgcgagacgaaggcaaaactatcgccattggcaaagtgctgaag
ctggtgccagaaaaggactaa
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