Epinephelus lanceolatus (giant grouper): 117247477
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Entry
117247477 CDS
T07331
Symbol
thrab
Name
(RefSeq) thyroid hormone receptor alpha-B isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04080
Neuroactive ligand-receptor interaction
ely04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117247477 (thrab)
04081 Hormone signaling
117247477 (thrab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117247477 (thrab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ely03310
]
117247477 (thrab)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117247477 (thrab)
Nuclear receptors [BR:
ely03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117247477 (thrab)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117247477
NCBI-ProteinID:
XP_033467956
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Position
21:complement(33183047..33413594)
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AA seq
428 aa
AA seq
DB search
MEHAPKEQDPNPSEGEEKRWLNGPKRKRKNSQCSLKSMTARCLSDSSKSPELKEANKEGY
IPSYLEKDEPCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKI
TRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRRLIEENRERRKKEEMVKSLQNRPEPTD
SEWEVIHLVTEAHRHTNAQGAQWKQKRKFLPEKIGQSPVAPTSDGDKVDLEAFSEFTKII
TPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAMRYDPESETLTLGGEMAV
KREQLKNGGLGVVSDAIFDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCMEKIEKCQ
ETYLLAFEHYINYRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFL
EVFEDQEV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgcgcccaaggagcaggaccctaacccatcagagggagaagagaaacggtgg
ctcaatggcccgaaaaggaagaggaagaacagccaatgttcgttgaagagtatgactgct
cgttgtctgagtgacagctccaaatcccccgagctgaaagaggcgaataaagaagggtac
atccccagctacctcgaaaaggatgagccatgtgtggtgtgtggcgacaaggccacaggt
taccactaccgctgcattacctgcgagggctgcaagggtttcttccgtaggaccattcaa
aagaacctccaccccagctactcctgtaagtacgatggctgctgcatcatcgacaagatc
acccgcaaccagtgtcagctctgccgcttcaagaagtgcatcgcggtgggcatggccatg
gacttggtgctggatgactcaaagcgggtggctaaacggcgtctgattgaagagaacagg
gagcggcgcaagaaggaggaaatggtgaaatccctccagaaccgtccagagcccaccgac
agcgagtgggaggtgattcacctggtgacggaggcccaccgacacaccaatgctcagggc
gcacagtggaaacagaagcgcaaattcctgccagaaaaaatcggccagtccccggttgcc
ccgacgtcagacggagacaaggtggacctggaggccttcagcgagttcaccaagatcatc
actcctgccatcacccgtgtggtcgactttgccaaaaaactgcccatgttctctgagcta
ccttgtgaagaccagatcatcctgttgaagggctgctgcatggagatcatgtcgctgcga
gctgccatgcgctacgacccagaaagtgagacgctgacgctgggaggggagatggccgtg
aagcgtgagcagctgaagaacggcgggctgggcgtggtgtcggacgccatcttcgacctg
ggcaagagcctggcgcagtttaacctggacgacacggaggtggcgctgttgcaggccgtg
ctgctcatgagctcagatcgttctggcctgacctgcatggagaagatcgagaagtgccag
gagacctacctgctggcgttcgagcactacatcaactaccgcaagcacaacattcctcac
ttctggccgaagctcctgatgaaggtgacagacctgcggatgatcggggcatgccacgcc
agccgcttccttcacatgaaggtggagtgtcccaacgaactcttccccccgctcttcctg
gaggtcttcgaggaccaggaggtgtga
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