Epinephelus lanceolatus (giant grouper): 117248067
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Entry
117248067 CDS
T07331
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117248067
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ely04990
]
117248067
Domain-containing proteins not elsewhere classified [BR:
ely04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117248067
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117248067
NCBI-ProteinID:
XP_033468684
LinkDB
All DBs
Position
22:35242887..35327403
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AA seq
568 aa
AA seq
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MSTYTVSLPGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLVQGDVIVAIDGVGTDG
MTHLEAQNKIKMANYNLALTMTKAKRPIMMPPPRIDATIPLIPHQQVFPLTAPNPGSNHA
ALPTHKPIEVKGPGGKATITHAQYNTPISMYSQDSIMDAIAGQTQGKGHEVGPTEHVPGS
ADSTLTALQPLDPAPASPGPDPHSQYGQPPTMHHTPQAPPPQHYQQPVHQPYHQQVPQQY
HHHPAQQAPPIQSSIQIPLGSAPSKVVSTARIYPSQSASAPAPAPPQPRPPAAALTPAPA
GPASSNRPPWVADTNFANKYDPSKTTTTTIKMQPLPQAAPPPPAYIPNPSSTAPAAPSPA
PVTPSPAPFSPVARGVAQRAERFAASSRTPLCGACNSVIRGPFLVALGRSWHPEEFNCHY
CHMSLADVSFVEEQNNVYCENCYEEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAAC
GKAFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAV
CHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctacactgtgtcgctgcccggccccggcccctggggcttcaggctgcagggg
gggaaggacttcaacatgccgctgactatctctaggatcactcccggcagcaaggcggcg
cagggcaacctggtccagggtgatgtcatcgtcgccattgatggcgttggaaccgacggg
atgactcacctggaggctcagaacaagatcaagatggccaactacaacctggcgctcacc
atgacaaaggcgaagcgtcccatcatgatgccaccgccaagaatcgacgccactattccc
ttgatccctcatcaacaggttttccctctcactgctcccaacccaggatccaaccacgcc
gccctccccacccataagcccatagaggtgaagggccccggcggcaaggccaccatcacc
cacgcccagtacaacacccccattagcatgtactcgcaggactccatcatggacgccatc
gcagggcagacgcaggggaaggggcatgaagttggccctactgagcatgttccaggttct
gccgactcaaccctcaccgctctgcagcctctggaccccgcccccgcttcacctggcccc
gaccctcacagccaatacggtcaacctcctactatgcatcacactccacaagccccgcct
cctcagcattatcagcagccagtccatcagccataccaccagcaagtcccacagcagtac
catcatcatcccgcacaacaggccccgcccattcagagctccattcagatccctcttggc
tccgccccttccaaggtggtcagcaccgcccgcatctacccctcccagtcagcctcagct
cctgctcctgctccacctcagccccgccctccagctgctgccctgaccccagctccagct
ggtcctgcctcctctaatcgacccccctgggtggccgacaccaacttcgccaacaagtat
gaccccagtaagacaaccaccactaccataaagatgcagccgctaccccaggctgcccct
cctccaccagcatacatccccaacccctcctccaccgcccctgcagctcccagccccgcc
cctgtcacaccaagccctgccccgttctcacctgtggcgaggggcgtggctcaaagggcg
gagaggttcgccgctagcagccgtacacctctgtgtggggcctgcaacagcgtcatcagg
ggccctttcctggtggcccttggccggtcctggcaccctgaggaatttaactgtcactac
tgccacatgtctctggctgacgtgagcttcgtggaggagcagaacaacgtctactgtgag
aactgctacgaggagttcttcgctcccacctgtgcccgctgcaacaccaagatcatgggg
gaagtgatgcatgccctgcggcagacgtggcacaccacctgcttcgtgtgtgcggcctgc
ggcaaagcctttggaaacagcctcttccacatggaggatggagagccatactgcgagaaa
gattacatcgcactcttcagcactaagtgtcatggctgcgacttcccggttgaagctggt
gataagttcattgaggctctgggtcacacctggcacgacacctgcttcgtctgtgcggtt
tgccatgtgaaccttgagggccagcctttctactcaaagaaagacaaacctctgtgcaag
aagcacgctcacgccatcaacgtgtag
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