Epinephelus lanceolatus (giant grouper): 117248237
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Entry
117248237 CDS
T07331
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04517
IgSF CAM signaling
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117248237 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117248237 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117248237 (sptbn1)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117248237 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
117248237 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
DUF7854
Motif
Other DBs
NCBI-GeneID:
117248237
NCBI-ProteinID:
XP_033469021
LinkDB
All DBs
Position
22:complement(35617475..35794967)
Genome browser
AA seq
2381 aa
AA seq
DB search
MELQSATSGLPGPLSPGHLSPTLDYAGPLSPSSGGPGPSHPTSPGRGTSPSLSPIRGPSP
GPGFSGQAAFNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGR
MLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLT
LGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGM
AFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSI
ITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILN
NRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREG
KLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVS
QDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVSVAKELEAESYHDIKRITARKDNV
IRLWEYLLELLKARRQRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDL
LQKHALVEADIAIQADRVRNVNRNAQKFADDMEGYKPCDPQIIRDRVAHMDFCYQELSQL
AAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSEDYGKDLTGALRLLSQHKAFEDE
MSGRAGHLQQTIKQGEELVADNHFGADKIKERIQDIQEQWAALERLSAVRKARLQEACNQ
HQFQADADDIDTWMLDVLRIVSSVDVGHDEFSTQALVKKHKDVAEEIGSYRPVIEALHDQ
SRTLPPEKADSEEVKSRLAGIEERYKEVVELTRLRKQALQDALALYKMLSEASACELWID
EKEQWLNSMEIPEKLEDLEVVQHRFESLEPEMNNQASRVAVVNQVARQLIHSGHPSEKEI
KAQQDKLNTRWSQFRDLVDQKKDSLSSALGVQNYHLECNETKSWIKEKTKVIESTQELGN
DLAGVMALQRKLTGMERDLAAIGDKLGDLGKEAERLATEHPDQSEAIKGRLAEITTVWDE
MKDTMKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQHEN
IKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLS
QSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKIS
GVVDTGRRLVTDGNINAERIQEKVDSIDQRHKKNRAAASDLLMRLKDNRDLQKFLQDCQE
LSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIDKDGKALMAEKPE
TEAMVKEKLASLKTMWEDLESTTQTKAKCLFDANKAELFTQSCADLDKWLASLDGQLQSD
DYGKDLTSVNILLKKQQILESQVEVRQKEVGELQSQSQALSQEGKGSEEVDGQRIGVENK
FHALQAPLKKRRENLMASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQMLIKK
NQTLQKEIQGHQPRYDDIFERSQHVLRKDSPTAEFIRQRLAELQSLWDQIKKETEKRHTR
LNEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADT
VHQLSSTSRGLVAAEHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREV
DDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNRQADELIN
TGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNRILDKHKK
LPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREG
EKRKGEVLEAWKNLLEAAEGRRAKLVDTGDKFRFFSMVRDLMLWMEDVIRLIDAQEKPRD
VSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLARKHYASEEIKEKLLQLTDKRKDM
IDKWEDRWEWLRLVLEVHQFSRDAGVAEAWLLGQDPYLSSREIGQSVDEVEKLIKRHEAF
EKSAATWEERFAALERLTTMELLEVRRLQEEEEKKRQPPPTEAQPGDAAAQHREGEPVSQ
NGLPSDQESPRDNVDGGEVVNGVSEPSPAGSPGASRKGKASQAATLPAKTQQDAPTSQLE
GFLHRKHEWEGHNKKASSRSWHNVYCVINQQEMGFYKDQKSASQGIPYHSEIPVSLKEAV
CEVALDYKKKKHVFKLKITDGNEYLFQAKDDEEMNVWITAITAAVSGDKVEVTPSSHSTP
APTARAQTLPASVATAAAAESSPGKREKDKEKRFSLFSKKK
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagcgccaccagcggtctccccggccctctctcccctggccatctgtcc
ccgactttggactatgctggccctctgtccccatcgtcgggtggccctggcccatctcac
cccacaagccctggccggggtacgagccccagcctcagccccatcagggggcccagccct
ggccccggattctcaggccaggctgcgttcaactacaaccagctggaagggaggtttaaa
caacttcaagatgagcgtgaggcggtgcaaaagaaaaccttcaccaaatgggtgaactcg
cacctatccagagtttcctgtcggatcaccgacctctacatggacctgagggacggacgc
atgctcatcaaactgctggaggtcctgtcaggagagaagctgcccaaacccaccaagggt
cggatgaggatccactgtctggagaacgtggataaggctctgcagttcctgaaggagcag
agggttcacctggagaacatgggctcccacgacatcgtcgacggaaaccaccgccttact
ctggggctcatctggaccatcatcctccgcttccagatccaggacatcagtgtggagacg
gaggacaacaaggagaagaagtcagctaaagatgctctgctgctctggtgtcagatgaag
acagcaggatatcccaacgtgaacatccacaacttcagcaccagctggagagacgggatg
gccttcaacgctctcatccataaacacagaccggacctgattgactttgataagctgaag
aaatcaaacgctcactacaacctgcagaatgccttcaacctggctgagcaacacctgggc
ctcaccaagctgctggaccccgaagacatcagcgtggaccaccctgatgagaagtccatc
atcacctacgtagtcacctactaccactacttctccaagatgaaggcgctaaaggtggag
gggaagagaatcggcaaggttctggacaacgccatcgagacggagaagatgattgagaaa
tacgagtctctggcgtcagacctgctggagtggatcgaacagaccatcatcatcctcaac
aacaggaagtttgccaactctctggtgggagtccagcagcagctgcaggccttcaacacc
taccgcactgtggagaaaccaccaaagttcacagagaaaggaaacctggaggttcttctg
ttcaccatccagagtaagatgagagccaacaaccagaaagtttacactccccgagagggc
aaactcatctccgacatcaacaaggcatgggagcgtctggagaaggcagagcacgagcgg
gagctggctctgaggacggagctgattcgtcaagagaagctggagcagctggctcgacgc
ttcgaccgcaaggccgccatgagggagacgtggctgagtgagaaccagaggctggtctcc
caggataactttggttttgacctccaggccgtagaagcagcgactaagaaacatgaagcc
atagaaacagacatcgcagcgtacgaggagcgagttcaggcggtggtttccgtggcaaag
gagctggaggcggagagttaccatgacatcaaacgcatcacggccaggaaggacaacgtg
atccggctgtgggagtacctgctggagctgctcaaggcccgcaggcagagactggagctg
aacctgggcctgcagagagtcttccaggagatgctctacatcatggactggatggacgag
atgaagatgctgctgctctctcaggattacgggaaacacctgctgggtgtggaggacctg
ctgcagaaacacgctctggtggaggctgacatcgcgattcaagccgacagagtccgaaac
gttaacaggaacgctcagaagttcgctgacgacatggagggttataagccctgtgatcct
cagatcatcagggatcgggtcgctcacatggacttctgctaccaggagctgagtcagctg
gcggctgagcggcgagctcgcctcgaggagtcccgccgcctctggaagttcttctgggaa
atggcagaagaggagggctggatcagggagaaggagcagatcctgtcctctgaggattac
ggcaaggatctgacgggagcgttgcgtctgctgagtcagcacaaagccttcgaagacgag
atgagcggaagagccggccacctgcagcagaccatcaaacagggcgaggagctggtggcc
gacaaccactttggagccgacaagattaaagaacgcatccaggacatccaggagcagtgg
gcggctctggagcgtctctctgccgtccgtaaagctcgtctgcaggaggcctgcaaccag
caccagttccaggctgatgccgacgacatcgacacgtggatgctggacgtgctgcggatt
gtctccagtgtggacgtcggtcacgacgagttctccactcaggctctggtgaagaaacac
aaggacgtggccgaggagatcggcagctaccgacccgtcattgaggctctgcacgaccag
tctcgcacgctgccgcctgagaaggccgactctgaggaggttaagagccggctggcgggc
atcgaggagcgttacaaggaggtggtggagctgacgcggctcaggaagcaggcgctgcag
gacgctctggctctctacaagatgctaagtgaagccagcgcttgcgagctttggatcgat
gagaaggagcagtggctcaacagcatggagatccccgagaaactggaggacctggaggtc
gtccagcaccggtttgagagtttggagccagagatgaacaaccaggcatctcgggttgcc
gtggtgaaccaggttgccaggcaactgatccacagcggacatcccagcgagaaggagatc
aaagcccagcaggacaaactcaacaccaggtggagtcagttcagagacctggtggaccag
aagaaagacagcctgagctcggctctcggcgtccagaactatcacctggagtgtaacgag
accaaatcctggatcaaagagaaaaccaaggtgatcgagtcgacccaggagctggggaac
gacctggccggagtcatggctctgcagaggaagctgacaggaatggagcgcgacctggcc
gccatcggagacaagttgggagacctggggaaagaggctgagcgcttggccaccgaacac
ccggaccagtctgaggccatcaagggtcgtctggctgagattacgaccgtctgggacgag
atgaaggataccatgaagaaccgagaggagtccctgggcgaggccagcaagctgcagcag
ttcctgcgcgacctggacgacttccagtcgtggctgtcacggacgcagacggccattgcc
tccgaggacatgcccaacacgctggccgaggccgagaagctgctggcccagcacgaaaac
atcaagaacgagatccgcaactacgaagaggactaccagaagatgcgggacatgggcgag
atggtgacacagggtcagacggacgcgcagtacatgttcctacgtcagcggctgcaggcg
ctcgacaccggctggaacgagctgcacaagatgtgggagaaccggcagaacctgctgtcc
cagtcccacgcttaccagctgttcctcagggacaccaagcaggccgaggccttcctcaac
aaccaggagtacgtcctggctcacactgagatgcccaccactctggagggagccgaggct
gccatcaagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcagc
ggcgtggtggacaccggacgccgcctggttaccgatggcaacattaacgccgagcgcatc
caggagaaggtggactccatcgatcagagacataagaagaaccgagcggctgccagcgac
ctgctgatgaggctgaaggacaacagagacctgcagaagttcctgcaggactgccaggag
ctgtctctgtggatcaacgagaagatgctgacggctcaggacatgtcgtacgacgaggcc
aggaacctccacagcaagtggctcaaacaccaggccttcatggccgagctgcagtccaac
aaggagtggctggataagatcgacaaggacgggaaggcgctgatggctgagaagccggag
acagaggccatggtcaaggagaagctggcgtctctgaagacgatgtgggaggacctcgag
tcgaccacgcagacgaaagccaagtgtctgtttgacgccaacaaggcggagctgttcact
cagagctgcgctgacctcgacaagtggctagccagcctggacggacagctgcagtccgat
gactatggcaaagatctcacctctgtcaacatcctgctcaagaaacagcagatcctggag
agccaggtggaggtgcgtcagaaggaggtgggagagctgcagagccagtcgcaggccctc
agtcaggaggggaaaggctcggaggaggtggacggccaaaggatcggcgtggagaacaag
ttccacgccctccaggcaccactgaagaagagacgagaaaacctcatggcctcccgcgag
atccaccagttcaacagggacgtggaggacgagatcctgtgggtcgaggagaggatgcct
ctggccacatcgaccgaccatggacacaacctgcagactgtacagatgctcatcaagaag
aaccagaccctgcagaaggagatccagggtcatcagccgcgctacgacgacatcttcgaa
cgcagccagcacgtcctgaggaaagacagcccgacggccgagtttattcgccagcgcctc
gccgagctccagtcgctatgggatcagatcaagaaggagacggagaagcgtcacacccgc
ctcaacgaggcccacaaggcccagcagtactacttcgacgccgccgaggctgaggcctgg
atgagcgaacaggagctctacatgatgtcagaggagaaggccaaggacgagcagagttcg
gtggccatgctgaagaagcaccagatcctggagcaggcggtggaggattacgccgacacc
gtccaccagctctccagcaccagccggggcctggtggccgccgaacaccccgacagtgag
cgtatcggcatgcgtcagtctcaggtggacaagctgtacgccgggctcaaggacttgtca
gaggagcgtcgggggaaactggacgagcgattccgtctcttccagctgaaccgggaggtg
gatgacctggagcagtggatcgcagagagggaggtggtggccggatctcacgagctggga
caggactacgagcatgtcaccatgctgcaggagcgcttcagagaattcgcccgtgacacc
gggaacatcggccaagagcgcgtggacgctgtcaaccggcaggcggacgagctgatcaac
accggccacagcgacgccgccaccattgcagagtggaaggacggtctgaacgaggcctgg
gccgacctgctggagctcatcgacacccggacgcagatcctcgccgcctcctatgaactc
cacaaattctaccacgacgccaaggagatcctcaaccgcatcctggacaaacacaagaag
ctcccggaggagctgggccgcgaccagaacacagtggagaccctgcagaggatgcacacc
acctttgaacacgacatccaggcactgggaacacaggtgcggcagcttcaggaggacgca
gttcgtctgcagtctgcttacgctggagataaagctgacgacatccagaagagagaagga
gagaagagaaagggagaggtccttgaggcctggaagaacctgctggaggcggcggagggc
cgccgggcgaagctcgtcgacaccggagacaagttccgcttcttcagcatggtgcgcgac
ctgatgctttggatggaggacgtcatccgtctgatcgatgctcaggagaagcccagggac
gtgtcgtcagtggagctgctgatgaacaaccaccagggcatcaaggcagagatcgacgcc
cgcaacgacagcttcacagcctgcatcgagctgggcaaagccctgctggccaggaagcac
tacgcttcagaggagattaaagaaaagttgttacagttgacggacaagaggaaagacatg
attgacaagtgggaggacagatgggagtggctgagactggttctggaggtgcaccagttc
tcccgggacgcaggtgtggccgaggcgtggctgctgggtcaggatccatatctgtccagc
agggagatcggccagagcgtggacgaggtggagaaactcatcaaacgccatgaggccttc
gagaagtcggccgccacctgggaggaacgctttgccgctctggagaggctgaccacgatg
gagttattggaagtgagaagactgcaagaggaagaagagaagaagagacaacctccgccc
actgaggctcagcctggtgatgctgcagctcagcacagggagggtgagccagtgtctcag
aacgggctgccgtccgatcaggagtctcccagggataatgtcgatggtggagaggtggtg
aatggggtgtcggagcccagccccgcagggtctccaggggcgtctcgcaagggcaaggcc
agccaggcggcaaccttgccggctaagacccagcaggatgctcccacgtcccagttggag
ggcttcctgcatcgcaaacatgagtgggagggacataacaagaaggcttcaagcaggtcg
tggcacaacgtgtactgtgtgatcaatcagcaggagatgggtttctataaagatcagaag
agcgccagtcagggtattccctaccacagcgagattcctgtcagcctgaaggaagctgtc
tgcgaggtggcgctggactacaagaagaagaaacacgtcttcaagctcaagattactgac
gggaatgagtatctcttccaagccaaagatgacgaagagatgaacgtgtggatcacggcc
atcacagccgctgtgtcgggcgacaaggtggaggtgacgcccagcagccatagcacgccc
gccccaaccgcacgtgctcagacgctaccggcctctgttgccacggcggcggcggctgaa
tccagcccaggcaaacgagagaaagacaaagagaaacgcttcagtctgtttagcaagaag
aaatag
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integrated database retrieval system
