Epinephelus lanceolatus (giant grouper): 117248450
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Entry
117248450 CDS
T07331
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117248450 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117248450 (vps8)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117248450 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
Clathrin
zf-RING_Vps41
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
PHD
ANAPC4_WD40
zf-C3HC4
zf-rbx1
Beta-prop_EML_2
PHD_4
zf-C3H2C3
Beta-prop_HPS5
Beta-prop_WDR3_1st
WDR55
EIF3I
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
117248450
NCBI-ProteinID:
XP_033469445
LinkDB
All DBs
Position
22:complement(7751570..7814244)
Genome browser
AA seq
1413 aa
AA seq
DB search
MSDSPDARSLLSASSQLNLMEVDAIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
CLLNTDNMDAHSCDTSSLASSDSGDPAHLKRRRRTVDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALVFGKDTNQALRLCLGTKATGAEFGAVSALS
INHDCSRLLCGFAKGQITMWDLASGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSGG
SVFELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLHAPPDFRDHPITHYSLLAMASLTKI
LVIGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTVNPILAFCKGDTVHFLLVSAQL
PLNFNIVKLRQISVCCMTRSPPVSMSLQWINSRTLVLVDSHEKLQVVDRPSQEVLETLDL
EQVQLVYNSRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIIYLGTKSAHIMTLRNW
RERIDCLLKQEHFVEALSLAWSFHEGTAKAVVGLFGDPVKRKGVVADKMVEILFQFADHA
LKKCPEQGKIQVMEQHFHDVIPVLVEHCLLLKRPDLLFNQLYARLVENTVAKGVFLESLE
SYIVGDRLGHLTTPIMKDLLAHYHGNGMMDSLERCIVHLDVTSLDIQQVVQVCWENQLYD
ALIYVYNSGMNDYITPMEKLFAMIGPPLKAGRSLTDEEVVMGNKLLVYISCCLAGRAYPL
GDIPEDLVVQVKNQVFEFLIRLHSADSLEEEEVFPFIRTLLHFDTREFLNVLAMTFEDFK
NDKQALEYQQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVL
EFLCCPDDDSRHTERQQVLLELLQVGGVVQFNEGRLLALAEKAKFYQICEFLYEKKHLYD
KIIDCYLRDPLRKGEIFSYIHNLLSMPGYSPEEKQAVKAKVLQHIQELVALDPIKSAELV
LFHFAQEVQQIISELQDDQLLFKFLSCLLEPREGHHSGVVLPLERDLHELLLDLLCRFAP
EQLLSFLQTSQHYRLEEAIHVTEKYHHNEATAYLLEKKGDVHGAFAVLLETLKENLNLLT
AECDRGADEGDGGQEEEERDSEITLTRVKNSLNDITDLCHRSSDNLYQQQREVLWFPLLE
TMMASQKLVKGLNADHTFEVLKELTMKVLNSMSSFISLPAIIQRILQDPVYGKGKLAEIQ
GLILGMLDTFNYEQTLLETTTSLLNHDLHWSLAHLRAAVTRGLHPRQDHCNICLQQYKRR
QDSAEEIIVFSCGHLYHLQCLQQKDSGWGPSSELQQRWICYKCSSSQGGRGGSTTEQKRG
RSTSLAQTRVTSMHHDAGAEAHRKKVFVEATLDLQQEQSWDQLRCLYRGPSRLSILSELS
HCHSSEKTGLLISAQPGTENFQLKLSPPPLLEE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattctccagatgcccgcagcctcctctctgcttcttcacagctcaacctgatg
gaggtggacgcgatcgatgataaggagtttgacattccccaagtggacacacctcccaca
ctggagagcatccttaatgagctggaggatgaggaggaaccatttgtgttggaggacacc
tgcttgctaaacacagacaacatggatgctcactcctgtgacacctcctctctggccagc
tctgacagtggagacccagctcacctcaaacgacggagaaggaccgtggatctgaatgca
actgttcatgggtctgttcttcgacacagtctcctgaagggcatctctgcacagatcgtc
tctgctgctgacaaagtggatgccggactgccaactgctataacagtatcgggtgtgatt
gctgtaggaacatctcatggtctggctctggtcttcggaaaagataccaatcaggctctg
cgcctctgtctgggtaccaaggcaactggagcagagtttggtgctgtctctgccctcagt
atcaaccatgactgctcacgccttctctgcggattcgccaaaggacagattacaatgtgg
gatctagcaagtgggaagctcctgagaacaatcactgatgcccatcctccagggacagct
atactgcatgtgaagttcacagatgatccaactcttgcagtgtgtaatgacagtggtgga
tccgtttttgagcttgctttcaggagggtgatggggatgcggtcctgtgactcgcggtgt
ctgtttagtggttctaaaggggaggtctgctgcattgaaccgttgcacgctcctccagac
ttcagagaccatcccatcacacactactctctgctggccatggcctctctcacaaagatt
ctggttattggactgaagccctcgctcaaagtgtggatgacttttccctacagcaagtct
gatccatccagtgtccctcagctggcgtggcagtttgttcctgttcagaagacagtcaac
ccgattctggctttttgtaaaggagacacagtccacttcctcctggtatctgctcaactc
cctcttaactttaatatagtaaaattgagacaaatctctgtttgctgcatgacccgttct
cctcctgtctccatgtctctgcagtggattaacagtcgtacgctcgtcctggtagacagc
catgaaaagctgcaggttgtggaccggcccagtcaggaggttttggagacactggacttg
gagcaggtgcaactggtctacaacagccgccatttcaagtcgctggcaactggagggaat
gtctcccaggctctggctctagtcggagaaaaggcctgctaccagtcagtctccagctat
gcaggacagattatctatttgggcaccaagtccgctcacattatgactctaagaaattgg
agagagcgaatcgactgcctgttgaaacaggagcattttgttgaggctctctctctggcc
tggtccttccatgaaggaactgctaaagctgtggttggtttgtttggagatccagtgaaa
aggaagggagtggtagctgacaagatggtcgagatccttttccagtttgcagatcatgct
ctgaagaagtgtccggaacaaggcaagatccaagtgatggagcaacatttccacgatgtg
attccagtcctggtggaacactgcctgctgctaaagaggccggacctgctgttcaaccag
ctgtatgctcggctggtggagaacacggttgctaagggagtctttctggagtcactggag
tcatacattgttggggatcgcctcggtcacctcaccacgcccatcatgaaggacctcttg
gcccattaccatggtaacggtatgatggacagcctggagagatgcattgttcacctggat
gtgaccagcctggacatacagcaggtggttcaagtgtgctgggaaaaccaactctatgat
gctctgatctatgtttacaacagcggaatgaatgactacattacacctatggagaaactt
tttgcaatgattggtccaccacttaaagctgggagaagcctgacagatgaggaagtggtg
atgggaaacaaacttctggtgtacataagctgctgtcttgcaggaagggcatatccacta
ggagacatccctgaagaccttgtggttcaagtcaagaaccaggtgtttgagttccttatc
cgtctacattcagctgactcattagaggaagaggaggttttcccatttattcgaactctc
ctccactttgacacccgggagttcctcaatgtcctcgccatgacatttgaagactttaag
aatgataagcaggccctggagtaccagcagaggatagtggacatcttactacaggtgatg
gtggacaacccagactttactccatcccaggtgggcgggctcttcacttttctggcacgc
cagttggctaagccagacaacacgctttttgtgaacaggaagctctttgatcaggttctg
gagttcctgtgttgcccagacgatgattcccgacacactgagaggcagcaggttctgctg
gagcttctccaggtcgggggtgttgtccagtttaatgaaggaaggctgttggccctggca
gagaaggccaagttctaccaaatctgtgaatttctgtatgagaagaaacatctgtacgac
aagatcattgactgctacctgagagaccccctcagaaagggggagatcttcagctacatt
cacaatctgctgtccatgcctggctacagcccagaggagaaacaagcagtcaaggccaaa
gtactgcaacacatacaggagctggtggcccttgaccccatcaagtcagctgaactagtg
ctgtttcactttgcccaagaggtgcagcaaatcatctctgagcttcaggatgaccagcta
cttttcaagtttctcagctgcctcctggagccacgggaaggtcatcactcaggagtcgtc
ctgcctctggaacgtgacctccatgagcttctgctggacttactgtgccgctttgccccc
gaacagctcctgagcttcctgcagacctcccagcactacagactggaggaggccatacat
gtaacagagaagtaccaccacaatgaggctacagcctatctactggagaagaagggagat
gttcatggagctttcgctgtcttgttagagacactgaaggaaaatctgaacctccttact
gctgagtgtgacagaggagctgatgaaggagatggaggacaggaagaagaggagagagac
agtgaaataacgctgacaagagtaaagaattcactgaacgacatcactgatctctgtcac
cgaagctctgacaacctctaccagcaacaaagagaggttctgtggtttccacttctggag
accatgatggcttctcaaaaactagtaaagggtctgaatgccgaccacacatttgaagtg
ctcaaggagctgaccatgaaggtgctcaactcgatgagcagctttatttctctgcctgcc
atcatccaacgaatactgcaggacccagtctacgggaaaggaaagctcgcagagatccaa
ggtctcattctgggtatgctggacacttttaactatgaacagactttacttgaaacaacc
accagcctgttgaaccatgacctccactggtccctggctcaccttcgcgctgctgtcaca
aggggactccacccacgacaagaccactgtaacatctgtctccagcagtacaagagaagg
caggactcagctgaggagatcattgtgttcagctgtggccacctgtaccacctccagtgc
ctgcaacagaaggactctgggtggggcccttcctcagagctacaacagcgatggatctgt
tacaagtgttcctccagccaaggaggaaggggggggtctactactgaacaaaaacgtggc
cgcagcacgtccctggcacagactcgtgttacatcaatgcatcatgacgcaggtgcagag
gctcacaggaagaaggtgtttgttgaagcaacgttggaccttcagcaggaacagtcctgg
gatcagcttcgctgtttgtaccgaggaccatccaggttgtccatcctttcagaactctct
cactgccacagcagtgagaagacaggccttctaatctcagcccaaccaggaacagagaat
ttccagctcaaactctctcctccacctctattggaagagtag
DBGET
integrated database retrieval system
