Epinephelus lanceolatus (giant grouper): 117248498
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Entry
117248498 CDS
T07331
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117248498 (sorcs3b)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Others
Others
117248498 (sorcs3b)
Endosome - Lysosome transport
117248498 (sorcs3b)
Endosome - Golgi transport
117248498 (sorcs3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
117248498
NCBI-ProteinID:
XP_033469530
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All DBs
Position
22:complement(27309805..27371484)
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AA seq
1243 aa
AA seq
DB search
MGLWSFWSFSLLAFVLLYPFHPKFVAQAEISLPRANDRFYRLEVTPPEARITRKSTAVKV
DNITKVLRAFESEAAGALKPNNGNQVGNETKSGLGEEPLIGNKTAPNCHKIPGEKCANIS
EDNQRRPAANIMLENTLPDTRKRVKRSVGTAHTENVDRSISGEAQSKERFVEAVQGVANS
RPEYRRGGEDARGANPRQGEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLYDF
NLGAVTESSLWRSSDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESAVLI
SSDEGASFEKHPINFNILSLLFHPAQENWMLAYSHDSKLYSSMDFGRKWQLVHDNVMPGR
FYWAVMGLDRESDVVHIETRIAKGRAQYVKCRAQRCTEGSRLYLFPGHVDTNSLVVQDEY
VFTQVTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYS
LYISDSPGVYFTLSLENLRTSRGPAGNLLVDFYKVEGINGMYLANKLLDSHVKTFITYNK
GQTWALLPAPVADVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVATGNI
GTELSSTNLGMFITSDAGNSWRQIFDEEHNVWFLDNGGALLAVLHAATPIRHLWISLDEG
KKWDRHSFSLAPLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFSRRCMDGD
YQTWHLHNKGELCVMGEKQIYMKRRPGNRCMLAQDYSRIYSSEPCLCTAYDFECDYGWER
QTDGKCSPAFWFNPNGVAKSCSTSQSFLNSTGYRKVLSNNCKEAGRNVYSPKRQLCRPRP
PRGLRLTTSQGELSATVGNNVTFMVYLEDGDSLRTSIQLDFGDGIKITYSNLSRTDDGIN
HIYRATGIYRVTASAENSHGSDSSTLFLHITSPVERIYLSTPIVAIRGKEVNLTALVWPS
HTRTLTFFWWFDNSSEPIITLEGSISYTFHREGKNKVTVQVASGSTIMQDSKVITVKEFF
RSLLLSFSPALDEHNPDIPEWREDIGRVVRTALSQVSGVPEDQLLVSLYPGLPSTAELFI
LPDEHTSSEHKRGSENALETISDIFVTALNQGLIQFELKADVRIIVYMTQQTLAPLVDSN
SIHSGSAMLMLLTVVFVGLVAFFIYKFKRKIPWIHVQTEDSHEKEPEVISTVGQNDKMSK
VKLSEFPSQKELMEKELEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggactgtggtcattttggagtttttcccttttggctttcgtcttgctgtaccccttt
caccccaagtttgtggctcaagcggaaataagtttacccagagccaacgacagattttat
cgcctggaggtaacgccaccggaggcacgtataacccgtaaatcaaccgcggtcaaagtg
gacaacatcacaaaagttttacgcgcttttgaatcggaggcagccggtgctttgaaaccg
aacaatggcaaccaagtggggaatgagacaaagagtggacttggagaggagccactgatc
ggcaacaaaacggcaccaaactgtcacaaaatacctggtgaaaagtgtgccaacatatcc
gaggacaaccagaggcgacctgcagcgaatataatgttagaaaacacacttcctgacaca
agaaagagggttaaaaggagtgtaggcacagcgcacaccgaaaatgtggataggagtata
agtggggaagcgcagtcaaaagagaggttcgtggaggctgtccaaggtgttgccaactcc
agacccgagtaccggcgcggcggggaagacgccagaggggctaacccgaggcagggtgag
ccgcacctggacacttctacttttgctctgtcgggagactccgcgcacaaccaggcgatg
gtgcactggtccggacacaacagcagcgtgatcctgatcttgactaagctgtatgacttc
aacctgggggctgttactgagagctcactctggagatcctctgattatggaagcacctac
accaaactcaacgacaaagtgggctcaaggacggttttaagttacctgtacgtctgcccg
accaacaaacagaagataatgatgcttagcgacccagaggtagagagcgctgttctcatc
agttcagatgaaggggcaagctttgagaagcatcccattaacttcaatatcctgagcctg
ctcttccatcctgcacaggagaactggatgctggcttacagtcatgacagcaagctgtac
agttcgatggactttgggaggaagtggcagcttgtccatgacaacgtgatgccaggccgg
ttctactgggcggtaatggggctggacagagaatcagatgtggtccacatcgagacgcgc
atcgcgaaaggccgcgcccagtacgtgaagtgcagagcccaacgctgcacagaaggcagc
cgactgtacctcttccctggacatgtagacaccaactcgctggttgtgcaggatgaatat
gttttcacacaggtaaccaagtcaggacgagccagctacttcgtctcctacatgagagag
tccttcaagcggatgaaattgcctaaatattgtcttccgaaggacatgcatatcatcagt
acagatgagaagcaggtatttgctgcagtccaggagtggaatcagaacaacacttacagc
ctgtatatctcagactcccccggggtctactttaccctttcattagagaatctgagaacc
agcagaggacctgctggtaacctactggttgacttttataaggttgaggggataaacggc
atgtatctcgccaacaaactgctggacagccatgtcaagactttcatcacatacaacaag
ggacaaacatgggccctgctgccagcccctgtcgctgatgtggctggaaacaaccttcac
tgcattctgccattttgttcgctgcatcttcatctggagatgtcggagaatccctacacg
tccggacccatcaccagcaagaagtccgtgccgggaatcatcgtggctacagggaatatc
ggaacagaactgtcctccactaaccttgggatgtttataacatctgatgcagggaatagc
tggaggcagatttttgatgaagagcacaacgtttggtttcttgacaatgggggggctttg
ctggcggtgttgcacgcagcgacgcctattcgacacttatggatcagtctagacgaagga
aaaaaatgggatcgccacagcttctccttggcacctctgtatgtggacggagttttaatg
gagccagaatctgacaatcacattatcactttctttggacactttagtcatcgatcagag
tggcaactgatcaagatcgactacaagggcctctttagtaggagatgcatggatggagat
tatcagacatggcaccttcacaacaagggagagctgtgtgtgatgggcgagaagcagatc
tatatgaagcgcaggccaggcaaccgttgcatgctggcccaggactattcgaggatctat
tcctcagagccatgcctctgcacagcctatgattttgaatgtgattatggttgggaacgc
cagaccgacggcaagtgctcccctgctttttggtttaatccaaacggtgtggctaaaagc
tgcagcaccagccaaagctttcttaacagcacagggtatcgtaaagttttgtccaataac
tgtaaggaggccgggaggaatgtgtactcgcccaagaggcagttgtgtcgccccagacca
cccagaggcctccggctgaccaccagtcaaggggagctcagtgccactgttggaaacaat
gttaccttcatggtctacctcgaagatggagactcgctgaggaccagcatccagctcgac
ttcggggacggcatcaagatcacatactctaacctgagcaggaccgatgatggcatcaac
cacatctacagagcgactgggatttaccgagtgacagcatctgccgaaaacagccacgga
tctgacagcagcacgctgtttttacacatcaccagtccagtggagcgtatatacctctcc
actcctattgtagccatcagggggaaggaggttaatctgactgcgttggtatggccgagt
cacaccagaacattgaccttcttctggtggtttgacaacagctccgagcccattataacc
ttggagggaagcatctcatacacatttcacagagaaggaaaaaacaaggtcacggtccag
gttgcttctgggagcaccataatgcaggattcaaaagttataactgttaaagagttcttc
aggtcgctgctgttgtcgttctcaccagctcttgatgaacacaaccctgacatccccgag
tggagggaggacatagggcgtgtggtgcggacagctctgtcacaggtgtctggggttcct
gaagatcagctgctggtgtctttgtatcctggacttccatccacagcagagctcttcatc
ctgcctgacgagcatacgtcaagtgagcacaagagaggaagtgagaacgctttagagacg
atatcagatatttttgtcactgccctgaaccaaggcctgatccagtttgagctgaaagcg
gatgttcgcattattgtgtacatgactcagcaaactttggcaccacttgtggattcaaac
tccatccacagtgggtcggctatgctgatgctgctcactgtggtgtttgttggtttagtg
gcattcttcatctacaagttcaaaaggaaaatcccttggatccatgttcagactgaagac
agtcatgagaaggaaccggaggtgatcagtacagtcggacagaacgacaagatgtccaag
gtcaagctcagtgaatttccctctcagaaagaactcatggaaaaggagttggaggccagg
agcagaggaggaattggaagaaatatggagagaattgtcacaagggaatttccaaactgt
actaatgtctga
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