Epinephelus lanceolatus (giant grouper): 117248572
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Entry
117248572 CDS
T07331
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04010
MAPK signaling pathway
ely04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117248572 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117248572 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117248572 (nfkb2)
Transcription factors [BR:
ely03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117248572 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
ZK643_helical
Motif
Other DBs
NCBI-GeneID:
117248572
NCBI-ProteinID:
XP_078016993
LinkDB
All DBs
Position
17:complement(1237445..1269479)
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AA seq
913 aa
AA seq
DB search
MAGALRMTEAQFINVYDNDLQMNLMQYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYMGHARVEVQLVTHTDPPRVHAHSLV
GRHCTENGTCTLDIGPNDLTASFSNLGILHVTKKGVVDVLSRRLREERKRQKGAHYHLTE
AEEISILKEAKELGKAMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNCIYDSKSPNASNL
KISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAI
VFKTPPYHSAEIERPVTVFLQLKRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYE
PWRGGGGRGGGAGGFGGGGGAGGAGGGGGFQFNQQMNGGGGGGGTGGVFFPGGFTGFGGG
TQMSGSAPQTGVTQQQTEGETGGQTGGQTGGQTGSPLQQQLFQLAAALHSRASQSARQTA
AALLQYCSTGDVRVLLALQRHLCGVQDGNGDTPLHLAIIHQQTGVIQQLIHTLLSSQQQN
ILNTANHLRQTPLHLAVITRQVKVVEVLLRAGADPSLLDKDGRSPLHLAALAGDNATLRP
LLAHLGERHAHLVNTPDFHGLHPLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHL
AVRENLFKVACTLITELKADVNASTFGGNTPLHLAASLGSPTLCSMLIAAGADKNVENDE
PLFFSSSSDEEQDEDEPIREQEAASQPINPRKRPAGGHTPLDLAKCQKVRNLLNSRQSPK
SSRHSSKKMKPSSSEEAEASGLDEDTLSRLVEVLSVGDVPWRKLAEKLGMMTLTHLYMDS
PTPCHHLLQHYQLGGGAVEGLVDALQSLGLTEGVRLLRHAELRDDKHSTDATVDSGFGSQ
PMEEEEEPPVANQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctaaggatgactgaagctcagttcatcaacgtctacgacaacgacctg
cagatgaatttgatgcagtacgactacattcctccagtggacataaagactgaaccctac
atacctgagacagctcatggtccctacattcaaatcatcgaggagccaaaacagaggggc
tttcgtttccgttatgagtgtgagggtccatcccatggtgggctcccaggggcctccagc
gagaagaacaggagaacctacccgaccgtgaagattaataactacatgggtcacgcccgg
gtggaggtccagctggtgacccacaccgaccctcctcgtgttcacgctcacagtctggtg
ggacgtcactgcaccgagaacggcacctgcacgctcgacatcggccccaacgacctcacc
gcctcattcagtaacctggggatcctccatgtgaccaagaaaggtgtggtggatgttctg
agccgaagactgcgagaagagaggaagagacagaagggagctcactatcacctgacagag
gcggaggagatctccatccttaaggaggccaaggagctgggcaaggcgatggacctgaac
atcgtcaggttaaagttcactgcctacctgcaggacagtaacggaggcttcaccagaggg
ctgaaacccgtcgtctccaactgcatctacgacagcaagtcaccaaacgcctccaacctg
aagatctctcggatggataagacatgtggctcagtgctcggaggagacgagatcttcctg
ctctgcgacaaagtccagaaagatgacattgagatccgtttttatgaggaggatgatgaa
ggaggctgggaggcattcggtgacttctcacctacagacgtccacaaacagtacgccatc
gtcttcaaaacaccgccctaccacagtgcagagatcgagcggcccgtcaccgtcttcctg
cagctgaagaggaaaaaggctggcgacagcagcgaccccaaacagttcacctacatacca
caggtccaagacaaagaggaggtgctgaggaagaaacagaagccactgcctcactatgaa
ccctggagaggaggaggaggaagaggcggaggagctggaggatttggaggaggaggagga
gctggaggagcaggaggaggaggaggattccagttcaaccagcagatgaatggaggagga
ggaggaggaggaaccggcggagtcttcttcccgggaggcttcacaggcttcggcggaggg
actcagatgtcaggctctgcccctcagacaggggttacccagcaacagacagagggagag
acaggaggacagacaggaggacagacaggaggacagactggctcaccactacagcagcag
ctgtttcagctcgccgccgccctccacagccgagcctctcagagcgccagacagacggct
gctgccttgctgcagtactgcagcaccggggatgtccgcgtccttctggcactccagaga
cacctctgtggcgtccaggacggcaacggagacactcctttgcacctggctatcatccat
cagcagacaggtgtgatccagcagctgatccacactctgctcagcagtcagcagcagaac
atcctcaacacggccaaccacctccgacagactcctctccacctggcggtgatcacccgg
caggtgaaggtggtggaggtgctgctaagggcgggggccgaccccagcctgctggacaaa
gatggccgcagtccgctccacctggcggcgctggctggagacaacgccacgctccgcccc
ctgctggctcaccttggagaacgccacgcccacctggtcaacactccggacttccatggt
ctccatcctctccacttggcggtgaggcgggacggcgagcgctgcctccgcctcctggtg
gagggcggagccaaaatcaatgcacctgagcagaagagcggaaacaccgccctccacctg
gctgtgagggaaaacctgttcaaggtggcctgcactctcatcacagagctgaaggccgat
gttaacgccagcacgttcggaggaaacacacctctgcacctggccgccagtctgggctca
ccgaccctctgctccatgcttatcgctgcaggtgctgataaaaacgtggagaacgacgag
ccgctcttcttcagctcctcctcggacgaagaacaggacgaagacgaaccaatcagagag
caagaggccgcctcacagccaatcaaccctcgcaagagaccagcaggaggacacaccccc
ctggacctcgccaagtgccaaaaggtgaggaacctgttaaactccagacagagtccgaag
tcgagtcgtcacagcagtaagaagatgaaaccgagcagctctgaagaggcggaggcttcg
gggctggacgaggacacgctgtcccggctggtggaggtcctgagtgtcggagacgtcccc
tggaggaaactggcagagaagctggggatgatgacgctgactcacctgtacatggacagt
ccgacgccctgccaccacctgctgcagcactaccagctgggtggaggtgcggtcgaaggt
ctggttgacgctcttcagtctctcggtctgacagaaggagtccgactgctgagacacgcc
gagctacgagacgacaaacacagcacagacgccacggttgacagcggctttggcagccag
ccaatggaggaggaggaggagcctcctgtggccaatcagtga
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